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contig_metadata

28 rows where bioproject = "PRJNA1226487" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1226487 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
335041 335041 PRJNA1226487_P_NODE_68021_length_248_cov_1.760000_g67919_i0 PRJNA1226487 68021 248 1.76 4.3648 Opitutus sp. GAS368 1882749 Bacteria Bacteria 141 9.31e-37   NR WP_091057957.1 1882749 g67919 i0 86.3 1.93548387096774 80 10 96.8 1 240 1 114 192 WP_091057957.1 glycosyltransferase [Opitutus sp. GAS368] diamond 480 141 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp. GAS368
6712784 6712784 PRJNA1226487_P_NODE_68026_length_248_cov_1.760000_g67924_i0 PRJNA1226487 68026 248 1.76 4.3648 Opitutus terrae 107709 Bacteria Bacteria 174 4.59e-39   NTclustered gi|177839040|gb|CP001032.1| 452637 g67924 i0 80.995 45.8225806451613 221 40 89 2 7 226 2261607 2261388 Opitutus terrae PB90-1, complete genome blastn 11364 174 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus terrae
7988389 7988389 PRJNA1226487_P_NODE_54847_length_265_cov_1.604167_g54745_i0 PRJNA1226487 54847 265 1.604167 4.25104255 Opitutus sp. GAS368 1882749 Bacteria Bacteria 337 5.97e-88   NTclustered gi|1085764882|emb|LT629735.1| 1882749 g54745 i0 89.734 1.98490566037736 263 27 99 0 1 263 3731113 3730851 Opitutus sp. GAS368 genome assembly, chromosome: I blastn 526 337 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp. GAS368
9263116 9263116 PRJNA1226487_P_NODE_75148_length_243_cov_1.811765_g75046_i0 PRJNA1226487 75148 243 1.811765 4.40258895 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 140 6.78e-41   NR HVR68205.1 2499141 g75046 i0 74.4 4.83950617283951 78 20 96.3 0 8 241 6 83 HVR68205.1 GFA family protein [Verrucomicrobiia bacterium] diamond 1176 140 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
14364005 14364005 PRJNA1226487_P_NODE_57992_length_260_cov_1.647059_g57890_i0 PRJNA1226487 57992 260 1.647059 4.2823534 Oleiharenicola sp. Vm1 3398393 Bacteria Bacteria 348 2.7e-91   NTclustered gi|2912653302|gb|CP180537.1| 3398393 g57890 i0 90.769 23.5153846153846 260 24 100 0 1 260 4110017 4110276 Oleiharenicola sp. Vm1 chromosome, complete genome blastn 6114 348 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Oleiharenicola Oleiharenicola sp. Vm1
15637827 15637827 PRJNA1226487_P_NODE_40393_length_288_cov_1.432558_g40291_i0 PRJNA1226487 40393 288 1.432558 4.12576704 Oleiharenicola lentus 2508720 Bacteria Bacteria 167 6.16e-50   NR WP_129045696.1 2508720 g40291 i0 87.5 1 96 12 100 0 1 288 80 175 WP_129045696.1 response regulator [Oleiharenicola lentus] diamond 288 167 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Oleiharenicola Oleiharenicola lentus
19461077 19461077 PRJNA1226487_P_NODE_80816_length_231_cov_3.721519_g80714_i0 PRJNA1226487 80816 231 3.721519 8.59670889 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 144 1.08e-38   NR TAK97310.1 2026799 g80714 i0 93.4 4.93506493506494 76 5 98.7 0 229 2 43 118 TAK97310.1 MAG: MmgE/PrpD family protein [Verrucomicrobiota bacterium] diamond 1140 144 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
20736533 20736533 PRJNA1226487_P_NODE_77957_length_241_cov_1.833333_g77855_i0 PRJNA1226487 77957 241 1.833333 4.41833253 Luteolibacter ambystomatis 2824561 Bacteria Bacteria 213 9.4e-51   NTclustered gi|2029343589|gb|CP073100.1| 2824561 g77855 i0 82.573 4.87136929460581 241 42 100 0 1 241 348754 348514 Luteolibacter ambystomatis strain 32A chromosome, complete genome blastn 1174 213 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter ambystomatis
26946092 26946092 PRJNA1226487_P_NODE_70682_length_246_cov_1.780347_g70580_i0 PRJNA1226487 70682 246 1.780347 4.37965362 Pedosphaera sp. Tous-C6FEB 1982324 Bacteria Bacteria 115 1.33e-27   NR PAW80850.1 1982324 g70580 i0 67.9 0.98780487804878 81 26 98.8 0 3 245 432 512 PAW80850.1 MAG: phenylalanine--tRNA ligase subunit beta [Pedosphaera sp. Tous-C6FEB] diamond 243 115 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera sp. Tous-C6FEB
27009354 27009354 PRJNA1226487_P_NODE_39062_length_290_cov_1.419355_g38960_i0 PRJNA1226487 39062 290 1.419355 4.1161295 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 142 9.07e-37   NR MBK9989251.1 2026799 g38960 i0 65.6 6.87931034482759 96 33 99.3 0 289 2 985 1080 MBK9989251.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 1995 142 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27293989 27293989 PRJNA1226487_P_NODE_39063_length_290_cov_1.419355_g38961_i0 PRJNA1226487 39063 290 1.419355 4.1161295 Candidatus Didemnitutus sp. 2814259 Bacteria Bacteria 145 4.6e-39   NR HVU18795.1 2814259 g38961 i0 73.7 1.97586206896552 95 25 98.3 0 285 1 145 239 HVU18795.1 PleD family two-component system response regulator [Candidatus Didemnitutus sp.] diamond 573 145 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Candidatus Didemnitutus Candidatus Didemnitutus sp.
27515124 27515124 PRJNA1226487_P_NODE_18643_length_368_cov_3.654237_g18541_i0 PRJNA1226487 18643 368 3.654237 13.44759216 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 61.2 4.96e-8   NR RYD20361.1 2026800 g18541 i0 44.4 2.95923913043478 81 40 62.8 3 8 238 203 282 RYD20361.1 MAG: phosphatidylinositol-specific phospholipase C domain-containing protein [Verrucomicrobiaceae bacterium] diamond 1089 61.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28620384 28620384 PRJNA1226487_P_NODE_50307_length_272_cov_1.547739_g50205_i0 PRJNA1226487 50307 272 1.547739 4.20985008 Terrimicrobiaceae bacterium 2832348 Bacteria Bacteria 73.2 1.02e-12   NR HRJ72513.1 2832348 g50205 i0 81.3 0.529411764705882 48 9 52.9 0 145 2 2 49 HRJ72513.1 BatA domain-containing protein [Terrimicrobiaceae bacterium] diamond 144 73.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae   Terrimicrobiaceae bacterium
29314857 29314857 PRJNA1226487_P_NODE_44589_length_281_cov_1.480769_g44487_i0 PRJNA1226487 44589 281 1.480769 4.16096089 Lacunisphaera sp. 1961806 Bacteria Bacteria 176 1.59e-53   NR HWA27332.1 1961806 g44487 i0 91.4 0.99288256227758 93 8 99.3 0 1 279 98 190 HWA27332.1 SDR family oxidoreductase [Lacunisphaera sp.] diamond 279 176 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera sp.
29440835 29440835 PRJNA1226487_P_NODE_58010_length_260_cov_1.647059_g57908_i0 PRJNA1226487 58010 260 1.647059 4.2823534 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 152 4.109999999999999e-43   NR MEY4387465.1 2026799 g57908 i0 89.5 0.992307692307692 86 9 99.2 0 1 258 163 248 MEY4387465.1 putative serine protease HhoB precursor [Verrucomicrobiota bacterium] diamond 258 152 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29472425 29472425 PRJNA1226487_P_NODE_56670_length_262_cov_1.629630_g56568_i0 PRJNA1226487 56670 262 1.62963 4.2696306 Verrucomicrobiia bacterium DG1235 382464 Bacteria Bacteria 100 1.36e-23   NR EDY85116.1 382464 g56568 i0 55.3 0.973282442748092 85 38 97.3 0 261 7 112 196 EDY85116.1 hypothetical protein VDG1235_4751 [Verrucomicrobiia bacterium DG1235] diamond 255 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium DG1235
29598740 29598740 PRJNA1226487_P_NODE_66750_length_249_cov_1.750000_g66648_i0 PRJNA1226487 66750 249 1.75 4.3575 Lacunisphaera sp. 1961806 Bacteria Bacteria 142 8e-41   NR HEX2860835.1 1961806 g66648 i0 86.7 2 83 11 100 0 249 1 40 122 HEX2860835.1 FliH/SctL family protein [Lacunisphaera sp.] diamond 498 142 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera sp.
29965187 29965187 PRJNA1226487_P_NODE_59311_length_258_cov_1.664865_g59209_i0 PRJNA1226487 59311 258 1.664865 4.2953517 Bacteria 2 Bacteria Bacteria 138 5.32e-38   NR MCU0789421.1 2026799 g59209 i0 78.6 3.8953488372093 84 18 97.7 0 3 254 93 176 MCU0789421.1 S8 family serine peptidase [Verrucomicrobiota bacterium] diamond 1005 138 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30104231 30104231 PRJNA1226487_P_NODE_50232_length_272_cov_1.547739_g50130_i0 PRJNA1226487 50232 272 1.547739 4.20985008 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 56.6 1.73e-7   NR RYD61954.1 2026800 g50130 i0 78.6 0.308823529411765 28 6 30.9 0 270 187 134 161 RYD61954.1 MAG: hypothetical protein EOP83_15845 [Verrucomicrobiaceae bacterium] diamond 84 56.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
30294319 30294319 PRJNA1226487_P_NODE_47872_length_276_cov_1.517241_g47770_i0 PRJNA1226487 47872 276 1.517241 4.18758516 Lacunisphaera sp. 1961806 Bacteria Bacteria 162 4.45e-47   NR HEY0863433.1 1961806 g47770 i0 87.9 3.94565217391304 91 11 98.9 0 2 274 65 155 HEY0863433.1 glycosyltransferase family 2 protein [Lacunisphaera sp.] diamond 1089 162 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera sp.
30452137 30452137 PRJNA1226487_P_NODE_3353_length_638_cov_2.051327_g3262_i0 PRJNA1226487 3353 638 2.051327 13.08746626 Synoicihabitans lomoniglobus 2909285 Bacteria Bacteria 135 1.07e-33   NR WP_330930613.1 2909285 g3262 i0 40.1 4.38244514106583 182 79 83.2 2 572 42 260 416 WP_330930613.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase [Synoicihabitans lomoniglobus] diamond 2796 135 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Synoicihabitans Synoicihabitans lomoniglobus
30831010 30831010 PRJNA1226487_P_NODE_63434_length_252_cov_1.720670_g63332_i0 PRJNA1226487 63434 252 1.72067 4.3360884 Oleiharenicola lentus 2508720 Bacteria Bacteria 55.8 1.2e-7   NR MES1168318.1 2508720 g63332 i0 45.7 0.964285714285714 81 38 91.7 3 2 232 42 120 MES1168318.1 hypothetical protein [Oleiharenicola lentus] diamond 243 55.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Oleiharenicola Oleiharenicola lentus
30957598 30957598 PRJNA1226487_P_NODE_39754_length_289_cov_1.425926_g39652_i0 PRJNA1226487 39754 289 1.425926 4.12092614 Opitutaceae bacterium 2006848 Bacteria Bacteria 58.2 1.45e-8   NR MFM9079835.1 2006848 g39652 i0 50.6 0.799307958477509 77 38 79.9 0 58 288 2 78 MFM9079835.1 hypothetical protein [Opitutaceae bacterium] diamond 231 58.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
30957599 30957599 PRJNA1226487_P_NODE_61934_length_254_cov_1.701657_g61832_i0 PRJNA1226487 61934 254 1.701657 4.32220878 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 68.2 3.37e-11   NR MEK7707197.1 2026799 g61832 i0 49.3 1.67716535433071 71 32 83.9 1 42 254 1 67 MEK7707197.1 peptidylprolyl isomerase [Verrucomicrobiota bacterium] diamond 426 68.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31209686 31209686 PRJNA1226487_P_NODE_70775_length_246_cov_1.780347_g70673_i0 PRJNA1226487 70775 246 1.780347 4.37965362 Terrimicrobium sp. 1965319 Bacteria Bacteria 129 1.02e-34   NR HEY5769635.1 1965319 g70673 i0 72.5 0.975609756097561 80 22 97.6 0 244 5 97 176 HEY5769635.1 formyltetrahydrofolate deformylase [Terrimicrobium sp.] diamond 240 129 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae Terrimicrobium Terrimicrobium sp.
31431558 31431558 PRJNA1226487_P_NODE_42096_length_285_cov_1.452830_g41994_i0 PRJNA1226487 42096 285 1.45283 4.1405655 Lacunisphaera sp. 1961806 Bacteria Bacteria 140 1.36e-39   NR MDI1249374.1 1961806 g41994 i0 83.9 0.91578947368421 87 14 91.6 0 284 24 142 228 MDI1249374.1 hypothetical protein [Lacunisphaera sp.] diamond 261 140 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera sp.
31861380 31861380 PRJNA1226487_P_NODE_56777_length_262_cov_1.629630_g56675_i0 PRJNA1226487 56777 262 1.62963 4.2696306 Opitutus 178440 Bacteria Bacteria 82 6.77e-16   NR WP_012376522.1 107709 g56675 i0 66.1 1.61450381679389 59 18 67.6 1 85 261 4 60 WP_012376522.1 glycoside hydrolase 43 family protein [Opitutus terrae] diamond 423 82 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus terrae
32462825 32462825 PRJNA1226487_P_NODE_73559_length_244_cov_1.801170_g73457_i0 PRJNA1226487 73559 244 1.80117 4.3948548 Pseudomonadati 3379134 Bacteria Bacteria 63.5 1.77e-9   NR MFO1446905.1 2006848 g73457 i0 52.7 1.35245901639344 55 26 67.6 0 1 165 586 640 MFO1446905.1 alpha/beta hydrolase [Opitutaceae bacterium] diamond 330 63.9 0.993740219092332 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;