RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1226487" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1226487 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
334920 334920 PRJNA1226487_P_NODE_4301_length_585_cov_9.121094_g4209_i0 PRJNA1226487 4301 585 9.121094 53.3583999 Ignavibacteria bacterium 2053306 Bacteria Bacteria 218 1.3e-61   NR HED37809.1 2053306 g4209 i0 77.3 0.676923076923077 132 28 67.7 1 578 183 1286 1415 HED37809.1 hypothetical protein [Ignavibacteria bacterium] diamond 396 218 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30546675 30546675 PRJNA1226487_P_NODE_77873_length_241_cov_1.833333_g77771_i0 PRJNA1226487 77873 241 1.833333 4.41833253 Ignavibacteria bacterium 2053306 Bacteria Bacteria 71.2 3.36e-12   NR MER3525130.1 2053306 g77771 i0 48.8 1.91701244813278 80 39 97.1 1 4 237 348 427 MER3525130.1 hypothetical protein [Ignavibacteria bacterium] diamond 462 71.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;