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contig_metadata

20 rows where bioproject = "PRJNA1226487", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 20 ✖

tax_phylum 1

  • Chloroflexota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1226487 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22011697 22011697 PRJNA1226487_P_NODE_51578_length_270_cov_1.563452_g51476_i0 PRJNA1226487 51578 270 1.563452 4.2213204 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 63.9 1.14e-5   NTclustered gi|2891482138|emb|OZ219871.1| 2026734 g51476 i0 97.297 1.28888888888889 37 1 14 0 1 37 35778 35814 MAG: Dehalococcoidia bacterium isolate adc01b0e-c114-4b94-a05b-fd73c1a39460 genome assembly, chromosome: 5 blastn 348 63.9 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
26914497 26914497 PRJNA1226487_P_NODE_57262_length_261_cov_1.638298_g57160_i0 PRJNA1226487 57262 261 1.638298 4.27595778 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 146 1.93e-38   NR HLF78640.1 2026734 g57160 i0 78.2 1 87 18 98.9 1 2 259 725 811 HLF78640.1 transglycosylase domain-containing protein [Dehalococcoidia bacterium] diamond 261 146 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
27167398 27167398 PRJNA1226487_P_NODE_45982_length_279_cov_1.495146_g45880_i0 PRJNA1226487 45982 279 1.495146 4.17145734 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 103 1.2e-24   NR HYN75003.1 3047546 g45880 i0 63 0.989247311827957 92 34 98.9 0 277 2 124 215 HYN75003.1 methyl-accepting chemotaxis protein [Candidatus Limnocylindria bacterium] diamond 276 103 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
27249558 27249558 PRJNA1226487_P_NODE_15643_length_388_cov_35.168254_g15541_i0 PRJNA1226487 15643 388 35.168254 136.45282552 Bacillati 1783272 Bacteria Bacteria 52.8 5.84e-5   NR MCC7372909.1 2026724 g15541 i0 50 1.15979381443299 50 21 38.7 2 234 383 41 86 MCC7372909.1 carbohydrate binding domain-containing protein [Chloroflexota bacterium] diamond 450 52.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27293999 27293999 PRJNA1226487_P_NODE_76483_length_242_cov_1.822485_g76381_i0 PRJNA1226487 76483 242 1.822485 4.4104137 Tepidiformaceae bacterium 3022862 Bacteria Bacteria 70.1 4.64e-13   NR HKS91096.1 3022862 g76381 i0 83.3 0.91735537190082606 36 6 44.6 0 2 109 35 70 HKS91096.1 (4Fe-4S)-binding protein [Tepidiformaceae bacterium] diamond 222 70.1 1 Bacteria   Bacillati Chloroflexota Tepidiformia Tepidiformales Tepidiformaceae   Tepidiformaceae bacterium
27325661 27325661 PRJNA1226487_P_NODE_63923_length_251_cov_1.730337_g63821_i0 PRJNA1226487 63923 251 1.730337 4.34314587 Chloroflexota bacterium 2026724 Bacteria Bacteria 44.3 0.00806   NR MDP9366921.1 2026724 g63821 i0 53.1 0.681274900398406 32 15 38.2 0 154 249 3 34 MDP9366921.1 J domain-containing protein [Chloroflexota bacterium] diamond 171 44.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27609927 27609927 PRJNA1226487_P_NODE_76404_length_242_cov_1.822485_g76302_i0 PRJNA1226487 76404 242 1.822485 4.4104137 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 58.5 9.67e-8   NR HSM84848.1 2952938 g76302 i0 92.9 2.71487603305785 28 2 34.7 0 2 85 442 469 HSM84848.1 glycosyltransferase [Candidatus Limnocylindrales bacterium] diamond 657 58.5 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
27988773 27988773 PRJNA1226487_P_NODE_72325_length_245_cov_1.790698_g72223_i0 PRJNA1226487 72325 245 1.790698 4.3872101 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 63.2 2.69e-11   NR HSM86740.1 2952938 g72223 i0 93.9 0.808163265306122 33 2 40.4 0 1 99 15 47 HSM86740.1 hypothetical protein [Candidatus Limnocylindrales bacterium] diamond 198 63.2 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
28146777 28146777 PRJNA1226487_P_NODE_47185_length_277_cov_1.509804_g47083_i0 PRJNA1226487 47185 277 1.509804 4.18215708 Chloroflexota bacterium 2026724 Bacteria Bacteria 69.7 1.85e-11   NR HZO31743.1 2026724 g47083 i0 85.4 0.444043321299639 41 6 44.4 0 123 1 89 129 HZO31743.1 ABC transporter substrate-binding protein [Chloroflexota bacterium] diamond 123 69.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29157155 29157155 PRJNA1226487_P_NODE_1629_length_804_cov_5.852257_g1549_i0 PRJNA1226487 1629 804 5.852257 47.05214628 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 150 6.56e-37   NR HTI71413.1 3047546 g1549 i0 38.9 4.76865671641791 262 144 93.7 9 45 797 22 278 HTI71413.1 response regulator [Candidatus Limnocylindria bacterium] diamond 3834 150 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
29504183 29504183 PRJNA1226487_P_NODE_42190_length_285_cov_1.452830_g42088_i0 PRJNA1226487 42190 285 1.45283 4.1405655 Chloroflexota bacterium 2026724 Bacteria Bacteria 148 9.5e-41   NR MFN8632546.1 2026724 g42088 i0 80.7 3.70526315789474 88 17 92.6 0 22 285 1 88 MFN8632546.1 glycosyltransferase [Chloroflexota bacterium] diamond 1056 148 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29819801 29819801 PRJNA1226487_P_NODE_62731_length_253_cov_1.711111_g62629_i0 PRJNA1226487 62731 253 1.711111 4.32911083 Chloroflexota bacterium 2026724 Bacteria Bacteria 100 5.27e-25   NR HZO30302.1 2026724 g62629 i0 71.2 0.782608695652174 66 19 78.3 0 248 51 70 135 HZO30302.1 hypothetical protein [Chloroflexota bacterium] diamond 198 100 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29977925 29977925 PRJNA1226487_P_NODE_77851_length_241_cov_1.833333_g77749_i0 PRJNA1226487 77851 241 1.833333 4.41833253 Chloroflexota bacterium 2026724 Bacteria Bacteria 101 8.939999999999999e-23   NR HZO29119.1 2026724 g77749 i0 66.2 0.95850622406639 77 26 95.9 0 239 9 560 636 HZO29119.1 protein kinase [Chloroflexota bacterium] diamond 231 101 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30167379 30167379 PRJNA1226487_P_NODE_77872_length_241_cov_1.833333_g77770_i0 PRJNA1226487 77872 241 1.833333 4.41833253 Chloroflexota bacterium 2026724 Bacteria Bacteria 130 7.56e-36   NR MDP8924163.1 2026724 g77770 i0 95.6 0.846473029045643 68 3 84.6 0 204 1 1 68 MDP8924163.1 response regulator transcription factor [Chloroflexota bacterium] diamond 204 130 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30198907 30198907 PRJNA1226487_P_NODE_49092_length_274_cov_1.532338_g48990_i0 PRJNA1226487 49092 274 1.532338 4.19860612 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 161 4.59e-46   NR HSM86137.1 2952938 g48990 i0 86.8 0.996350364963504 91 12 99.6 0 273 1 172 262 HSM86137.1 FAD-dependent oxidoreductase [Candidatus Limnocylindrales bacterium] diamond 273 161 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
30389118 30389118 PRJNA1226487_P_NODE_56113_length_263_cov_1.621053_g56011_i0 PRJNA1226487 56113 263 1.621053 4.26336939 Chloroflexota bacterium 2026724 Bacteria Bacteria 86.3 2.19e-17   NR MBA2448348.1 2026724 g56011 i0 84.8 1.06083650190114 46 7 52.5 0 3 140 472 517 MBA2448348.1 AMP-binding protein [Chloroflexota bacterium] diamond 279 86.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30609710 30609710 PRJNA1226487_P_NODE_133_length_1798_cov_3.026087_g110_i0 PRJNA1226487 133 1798 3.026087 54.40904426 Anaerolineales bacterium 2073117 Bacteria Bacteria 275 8.72e-78   NR HND47414.1 2073117 g110 i0 41.7 0.6440489432703 386 213 63.2 8 1796 660 464 844 HND47414.1 hypothetical protein [Anaerolineales bacterium] diamond 1158 275 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30849764 30849764 PRJNA1226487_P_NODE_1594_length_811_cov_2.265583_g1514_i0 PRJNA1226487 1594 811 2.265583 18.37387813 Bacillati 1783272 Bacteria Bacteria 46.2 0.00456   NR MEZ4511601.1 2026724 g1514 i0 43.1 0.514180024660913 51 29 18.9 0 1 153 1 51 MEZ4511601.1 tetratricopeptide repeat protein [Chloroflexota bacterium] diamond 417 46.6 0.991416309012876 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31494989 31494989 PRJNA1226487_P_NODE_46516_length_278_cov_1.502439_g46414_i0 PRJNA1226487 46516 278 1.502439 4.17678042 Chloroflexota bacterium 2026724 Bacteria Bacteria 134 7.95e-36   NR MCC7370421.1 2026724 g46414 i0 74.7 0.982014388489209 91 23 98.2 0 3 275 197 287 MCC7370421.1 flippase-like domain-containing protein [Chloroflexota bacterium] diamond 273 134 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32064163 32064163 PRJNA1226487_P_NODE_57998_length_260_cov_1.647059_g57896_i0 PRJNA1226487 57998 260 1.647059 4.2823534 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 132 7.96e-37   NR HSM86242.1 2952938 g57896 i0 75.6 3.96923076923077 86 21 99.2 0 259 2 87 172 HSM86242.1 hypothetical protein [Candidatus Limnocylindrales bacterium] diamond 1032 132 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;