RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1226487" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA1226487 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2885893 2885893 PRJNA1226487_P_NODE_47483_length_276_cov_11.812808_g47381_i0 PRJNA1226487 47483 276 11.812808 32.60335008 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 490 4.54e-134   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g47381 i0 99.262 0.981884057971015 271 2 98 0 6 276 2348 2618 Malassezia restricta virus MrV40L, complete genome blastn 271 490 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
9262980 9262980 PRJNA1226487_P_NODE_39648_length_289_cov_1.425926_g39546_i0 PRJNA1226487 39648 289 1.425926 4.12092614 Orbivirus magninsulae 3431249 Viruses Viruses 60.2 1.6e-4   NTclustered gi|2672713159|gb|OR645555.1| 881914 g39546 i0 97.143 0.217993079584775 35 1 12 0 255 289 1938 1972 MAG: Tribec virus isolate Romania segment 3, complete sequence blastn 63 60.2 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Orbivirus magninsulae
10538757 10538757 PRJNA1226487_P_NODE_21129_length_354_cov_12.427046_g21027_i0 PRJNA1226487 21129 354 12.427046 43.99174284 Cripavirus mortiferum 3047369 Viruses Viruses 640 5.619999999999999e-179   NTclustered gi|2395734185|gb|ON811696.1| 209529 g21027 i0 99.713 71.8954802259887 349 1 99 0 1 349 9751 9403 MAG: Aphid lethal paralysis virus isolate TIGMIC_1, complete genome blastn 25451 640 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus mortiferum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;