RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1226487", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1226487 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30439253 30439253 PRJNA1226487_P_NODE_873_length_999_cov_2.268898_g805_i0 PRJNA1226487 873 999 2.268898 22.66629102 Metazoa 33208 Echinodermata other_Eukaryota 102 6.33e-20   NR XP_041466350.1 7654 g805 i0 37.1 4.13213213213213 175 84 52 6 66 584 409 559 XP_041466350.1 uncharacterized protein LOC121416889 [Lytechinus variegatus] diamond 4128 102 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
32620618 32620618 PRJNA1226487_P_NODE_61160_length_255_cov_2.214286_g61058_i0 PRJNA1226487 61160 255 2.214286 5.6464293 Metazoa 33208 Echinodermata other_Eukaryota 45.1 0.0066   NR XP_022104873.1 133434 g61058 i0 45.1 4.81176470588235 51 28 60 0 2 154 310 360 XP_022104873.1 slit homolog 1 protein-like [Acanthaster planci] diamond 1227 45.4 0.993392070484582 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;