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contig_metadata

11 rows where bioproject = "PRJNA1226487", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 11 ✖

tax_kingdom 1

  • Bacillati · 11 ✖

bioproject 1

  • PRJNA1226487 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18186529 18186529 PRJNA1226487_P_NODE_54795_length_265_cov_1.604167_g54693_i0 PRJNA1226487 54795 265 1.604167 4.25104255 Bacteria 2 Bacteria Bacteria 139 7.16e-36   NR MBN9501973.1 2033014 g54693 i0 76.5 1.94716981132075 85 20 96.2 0 9 263 409 493 MBN9501973.1 DNA mismatch repair protein MutS [Armatimonadota bacterium] diamond 516 139 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
20173139 20173139 PRJNA1226487_P_NODE_52276_length_269_cov_1.571429_g52174_i0 PRJNA1226487 52276 269 1.571429 4.22714401 Fimbriimonas 1005038 Bacteria Bacteria 108 1.71e-25   NR MEZ0325255.1 1936159 g52174 i0 96.2 1.72862453531599 52 2 58 0 268 113 455 506 MEZ0325255.1 DUF1501 domain-containing protein [Fimbriimonas sp.] diamond 465 108 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
20736511 20736511 PRJNA1226487_P_NODE_69597_length_247_cov_1.408046_g69495_i0 PRJNA1226487 69597 247 1.408046 3.47787362 Fimbriimonas sp. 1936159 Bacteria Bacteria 141 9.11e-37   NR HEY0868259.1 1936159 g69495 i0 83.8 3.88663967611336 80 13 97.2 0 240 1 509 588 HEY0868259.1 aconitate hydratase AcnA [Fimbriimonas sp.] diamond 960 141 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
23287156 23287156 PRJNA1226487_P_NODE_23159_length_344_cov_15.206642_g23057_i0 PRJNA1226487 23159 344 15.206642 52.31084848 Chthonomonas calidirosea 454171 Bacteria Bacteria 274 6.379999999999998e-69   NTclustered gi|510021827|emb|HF951689.1| 1303518 g23057 i0 83.784 54.5901162790698 296 41 84 2 10 299 613631 613337 Chthonomonas calidirosea T49 complete genome blastn 18779 274 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea
29409475 29409475 PRJNA1226487_P_NODE_45329_length_280_cov_1.487923_g45227_i0 PRJNA1226487 45329 280 1.487923 4.1661844 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 132 6.529999999999999e-37   NR MBC8066233.1 2682144 g45227 i0 71.7 0.985714285714286 92 26 98.6 0 3 278 44 135 MBC8066233.1 PEP-CTERM sorting domain-containing protein [Fimbriimonadaceae bacterium] diamond 276 132 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
29535848 29535848 PRJNA1226487_P_NODE_69350_length_247_cov_1.770115_g69248_i0 PRJNA1226487 69350 247 1.770115 4.37218405 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 108 3.52e-25   NR MBC8065250.1 2682144 g69248 i0 86.7 0.728744939271255 60 8 72.9 0 181 2 1 60 MBC8065250.1 tetratricopeptide repeat protein [Fimbriimonadaceae bacterium] diamond 180 108 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30326049 30326049 PRJNA1226487_P_NODE_52932_length_268_cov_1.579487_g52830_i0 PRJNA1226487 52932 268 1.579487 4.23302516 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 154 2.74e-41   NR MBC8066000.1 2682144 g52830 i0 83.1 2.98880597014925 89 15 99.6 0 268 2 95 183 MBC8066000.1 D-alanine--D-alanine ligase [Fimbriimonadaceae bacterium] diamond 801 154 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30926041 30926041 PRJNA1226487_P_NODE_56134_length_263_cov_1.621053_g56032_i0 PRJNA1226487 56134 263 1.621053 4.26336939 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 148 4.1e-39   NR MBC8064208.1 2682144 g56032 i0 85.1 0.992395437262357 87 13 99.2 0 262 2 334 420 MBC8064208.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 261 148 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
31431561 31431561 PRJNA1226487_P_NODE_47716_length_276_cov_1.517241_g47614_i0 PRJNA1226487 47716 276 1.517241 4.18758516 Armatimonadota bacterium 2033014 Bacteria Bacteria 45.1 0.00134   NR MCC2672968.1 2033014 g47614 i0 42.4 0.641304347826087 59 32 62 1 98 268 10 68 MCC2672968.1 hypothetical protein [Armatimonadota bacterium] diamond 177 45.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31779372 31779372 PRJNA1226487_P_NODE_67917_length_248_cov_1.760000_g67815_i0 PRJNA1226487 67917 248 1.76 4.3648 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 78.2 1.31e-14   NR MCC7229389.1 2682144 g67815 i0 48.8 0.991935483870968 82 42 99.2 0 247 2 252 333 MCC7229389.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 246 78.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
32380781 32380781 PRJNA1226487_P_NODE_52279_length_269_cov_1.571429_g52177_i0 PRJNA1226487 52279 269 1.571429 4.22714401 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 144 1.78e-38   NR HJP83832.1 2682144 g52177 i0 85.3 1.6728624535316 75 11 83.6 0 267 43 114 188 HJP83832.1 M14 family metallopeptidase [Fimbriimonadaceae bacterium] diamond 450 144 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;