RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1226487", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1226487 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11813579 11813579 PRJNA1226487_P_NODE_42730_length_284_cov_1.459716_g42628_i0 PRJNA1226487 42730 284 1.459716 4.14559344 Candidatus Methylomirabilis oxygeniifera 671143 Bacteria Bacteria 124 5.48e-24   NTclustered gi|258590833|emb|FP565575.1| 671143 g42628 i0 95 23.7253521126761 80 3 28 1 30 109 896091 896169 Candidatus Methylomirabilis oxyfera complete genome blastn 6738 124 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis oxygeniifera
32809549 32809549 PRJNA1226487_P_NODE_54760_length_265_cov_1.604167_g54658_i0 PRJNA1226487 54760 265 1.604167 4.25104255 Pseudomonadati 3379134 Bacteria Bacteria 148 7.51e-44   NR HTO82829.1 2072417 g54658 i0 78.4 1.99245283018868 88 19 99.6 0 2 265 8 95 HTO82829.1 response regulator [Candidatus Methylomirabilota bacterium] diamond 528 148 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;