RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1226487", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1226487 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27957179 27957179 PRJNA1226487_P_NODE_40945_length_287_cov_1.439252_g40843_i0 PRJNA1226487 40945 287 1.439252 4.13065324 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 168 9.16e-47   NR HJW67881.1 2838779 g40843 i0 88.4 1.97560975609756 95 11 99.3 0 285 1 65 159 HJW67881.1 response regulator [Candidatus Binatia bacterium] diamond 567 168 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28683528 28683528 PRJNA1226487_P_NODE_20947_length_355_cov_3.553191_g20845_i0 PRJNA1226487 20947 355 3.553191 12.61382805 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 45.1 0.0185   NR HZO82793.1 2785449 g20845 i0 38.7 0.523943661971831 62 35 49.9 1 210 34 288 349 HZO82793.1 hypothetical protein [Candidatus Binataceae bacterium] diamond 186 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
29756737 29756737 PRJNA1226487_P_NODE_45331_length_280_cov_1.487923_g45229_i0 PRJNA1226487 45331 280 1.487923 4.1661844 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 94 6.279999999999999e-23   NR HSK43685.1 2838779 g45229 i0 66.7 0.707142857142857 66 22 70.7 0 202 5 12 77 HSK43685.1 hypothetical protein [Candidatus Binatia bacterium] diamond 198 94 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;