RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1218816" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1218816 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4160400 4160400 PRJNA1218816_P_NODE_43224_length_291_cov_1.055046_g42791_i0 PRJNA1218816 43224 291 1.055046 3.07018386 Fungi 4751 Fungi Fungi 188 2.27e-56   NR EPZ31463.1 988480 g42791 i0 86.5 4.94845360824742 96 13 99 0 3 290 56 151 EPZ31463.1 Actin-related protein 3 [Rozella allomycis CSF55] diamond 1440 188 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31893132 31893132 PRJNA1218816_P_NODE_61457_length_242_cov_1.822485_g61024_i0 PRJNA1218816 61457 242 1.822485 4.4104137 Fungi 4751 Fungi Fungi 123 3.28e-33   NR EPZ30856.1 988480 g61024 i0 70.5 6.90495867768595 78 23 96.7 0 235 2 24 101 EPZ30856.1 Proteasome subunit beta type-6 [Rozella allomycis CSF55] diamond 1671 123 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;