contig_metadata
11 rows where bioproject = "PRJNA1218816" and tax_phylum = "Chlorophyta"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5436541 | 5436541 | PRJNA1218816_P_NODE_33025_length_345_cov_2.643382_g32592_i0 | PRJNA1218816 | 33025 | 345 | 2.643382 | 9.1196679 | Ostreococcus tauri | 70448 | Plants | Plants | 219 | 3.04e-52 | NTclustered | gi|1275573527|ref|XM_022983366.1| | 70448 | g32592 | i0 | 79.56 | 14.3478260869565 | 318 | 55 | 90 | 6 | 26 | 335 | 961 | 1276 | Ostreococcus tauri S-adenosyl-L-homocysteine hydrolase, conserved site (OT_ostta09g02610), partial mRNA | blastn | 4950 | 219 | 1 | Eukaryota | Viridiplantae | Chlorophyta | Mamiellophyceae | Mamiellales | Bathycoccaceae | Ostreococcus | Ostreococcus tauri | ||
| 5436652 | 5436652 | PRJNA1218816_P_NODE_46365_length_278_cov_1.258537_g45932_i0 | PRJNA1218816 | 46365 | 278 | 1.258537 | 3.49873286 | Trebouxia sp. C | 2796353 | Plants | Plants | 132 | 5.12e-36 | NR | KAL3144114.1 | 3373145 | g45932 | i0 | 72.8 | 1.98561151079137 | 92 | 25 | 99.3 | 0 | 278 | 3 | 110 | 201 | KAL3144114.1 40S ribosomal protein S3a [Trebouxia sp. C0010 RCD-2024] | diamond | 552 | 132 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia sp. C0010 RCD-2024 | |
| 6149066 | 6149066 | PRJNA1218816_P_NODE_22365_length_454_cov_2.194226_g21932_i0 | PRJNA1218816 | 22365 | 454 | 2.194226 | 9.96178604 | Eukaryota | 2759 | Plants | Plants | 204 | 1.15e-47 | NTclustered | gi|371782121|emb|HE610153.1| | 36892 | g21932 | i0 | 94.656 | 45.5550660792952 | 131 | 7 | 29 | 0 | 262 | 392 | 3322 | 3452 | Pyramimonas olivacea 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain M1668 | blastn | 20682 | 204 | 1 | Eukaryota | Pyramimonas subgenus I | Viridiplantae | Chlorophyta | Pyramimonadophyceae | Pyramimonadales | Pyramimonadaceae | Pyramimonas | Pyramimonas olivacea | |
| 7986841 | 7986841 | PRJNA1218816_P_NODE_48607_length_269_cov_1.229592_g48174_i0 | PRJNA1218816 | 48607 | 269 | 1.229592 | 3.30760248 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 56.5 | 0.002 | NTclustered | gi|2082245480|ref|XM_001702139.2| | 3055 | g48174 | i0 | 92.5 | 1.08550185873606 | 40 | 1 | 15 | 2 | 96 | 135 | 1579 | 1616 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_05g233600v5), mRNA | blastn | 292 | 56.5 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 26870321 | 26870321 | PRJNA1218816_P_NODE_30381_length_365_cov_1.332192_g29948_i0 | PRJNA1218816 | 30381 | 365 | 1.332192 | 4.8625008 | Eukaryota | 2759 | Plants | Plants | 107 | 2.47e-24 | NR | WPT11501.1 | 1470871 | g29948 | i0 | 45.1 | 2.02191780821918 | 122 | 66 | 99.5 | 1 | 2 | 364 | 590 | 711 | WPT11501.1 Xanthine dehydrogenase 1 [Picochlorum sp. SENEW3] | diamond | 738 | 108 | 0.990740740740741 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Picochlorum | Picochlorum sp. SENEW3 | |||
| 26914447 | 26914447 | PRJNA1218816_P_NODE_31362_length_358_cov_1.038596_g30929_i0 | PRJNA1218816 | 31362 | 358 | 1.038596 | 3.71817368 | Monoraphidium minutum | 39955 | Plants | Plants | 55.5 | 4.58e-6 | NR | KAI8464992.1 | 39955 | g30929 | i0 | 46 | 1.13128491620112 | 63 | 32 | 51.1 | 2 | 28 | 210 | 186 | 248 | KAI8464992.1 MAG: hypothetical protein J3K34DRAFT_525742 [Monoraphidium minutum] | diamond | 405 | 55.5 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium minutum | |
| 27009311 | 27009311 | PRJNA1218816_P_NODE_61282_length_243_cov_0.905882_g60849_i0 | PRJNA1218816 | 61282 | 243 | 0.905882 | 2.20129326 | Cymbomonas tetramitiformis | 36881 | Plants | Plants | 67.8 | 3.61e-11 | NR | KAK3251077.1 | 36881 | g60849 | i0 | 48.6 | 1.76543209876543 | 72 | 35 | 86.4 | 2 | 234 | 25 | 1 | 72 | KAK3251077.1 Vacuolar protein sorting-associated protein 26B [Cymbomonas tetramitiformis] | diamond | 429 | 67.8 | 1 | Eukaryota | Viridiplantae | Chlorophyta | Pyramimonadophyceae | Pyramimonadales | Pyramimonadaceae | Cymbomonas | Cymbomonas tetramitiformis | ||
| 27483512 | 27483512 | PRJNA1218816_P_NODE_58223_length_246_cov_0.890173_g57790_i0 | PRJNA1218816 | 58223 | 246 | 0.890173 | 2.18982558 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 86.7 | 7.23e-20 | NR | XP_001694856.1 | 3055 | g57790 | i0 | 69.1 | 4.13414634146341 | 68 | 21 | 82.9 | 0 | 1 | 204 | 3 | 70 | XP_001694856.1 uncharacterized protein CHLRE_02g143050v5 [Chlamydomonas reinhardtii] | diamond | 1017 | 86.7 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 27957153 | 27957153 | PRJNA1218816_P_NODE_28005_length_386_cov_1.313099_g27572_i0 | PRJNA1218816 | 28005 | 386 | 1.313099 | 5.06856214 | Micractinium conductrix | 554055 | Plants | Plants | 229 | 1.06e-70 | NR | PSC67470.1 | 554055 | g27572 | i0 | 86.7 | 2.98445595854922 | 128 | 17 | 99.5 | 0 | 386 | 3 | 250 | 377 | PSC67470.1 hypothetical protein C2E20_8856 [Micractinium conductrix] | diamond | 1152 | 229 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Micractinium | Micractinium conductrix | |
| 30294272 | 30294272 | PRJNA1218816_P_NODE_50112_length_263_cov_1.621053_g49679_i0 | PRJNA1218816 | 50112 | 263 | 1.621053 | 4.26336939 | Auxenochlorella protothecoides | 3075 | Plants | Plants | 74.3 | 3.07e-13 | NR | XP_011401591.1 | 3075 | g49679 | i0 | 39.5 | 2.61216730038023 | 86 | 51 | 98.1 | 1 | 259 | 2 | 262 | 346 | XP_011401591.1 Peroxiredoxin-2 [Auxenochlorella protothecoides] | diamond | 687 | 74.3 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Auxenochlorella | Auxenochlorella protothecoides | |
| 30313219 | 30313219 | PRJNA1218816_P_NODE_54132_length_251_cov_0.865169_g53699_i0 | PRJNA1218816 | 54132 | 251 | 0.865169 | 2.17157419 | Eukaryota | 2759 | Plants | Plants | 82 | 6.13e-16 | NR | KAG2490500.1 | 47281 | g53699 | i0 | 49.4 | 18.4780876494024 | 81 | 40 | 96.8 | 1 | 246 | 4 | 452 | 531 | KAG2490500.1 hypothetical protein HYH03_011123 [Edaphochlamys debaryana] | diamond | 4638 | 82.8 | 0.990338164251208 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Edaphochlamys | Edaphochlamys debaryana |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;