contig_metadata
9 rows where bioproject = "PRJNA1218816", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2321567 | 2321567 | PRJNA1218816_P_NODE_32682_length_348_cov_1.120000_g32249_i0 | PRJNA1218816 | 32682 | 348 | 1.12 | 3.8976 | root | 1 | Root_unresolved | Root_unresolved | 486 | 7.619999999999999e-133 | NTclustered | gi|1338588479|gb|CP012673.1| | 56 | g32249 | i0 | 91.977 | 123.663793103448 | 349 | 24 | 99 | 4 | 1 | 346 | 3449540 | 3449193 | Sorangium cellulosum strain So ce26 chromosome, complete genome | blastn | 43035 | 486 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 27009310 | 27009310 | PRJNA1218816_P_NODE_55322_length_249_cov_1.539773_g54889_i0 | PRJNA1218816 | 55322 | 249 | 1.539773 | 3.83403477 | Archangiaceae bacterium | 2684409 | Bacteria | Bacteria | 155 | 1.21e-41 | NR | MBM4776370.1 | 2684409 | g54889 | i0 | 98.8 | 0.987951807228916 | 82 | 1 | 98.8 | 0 | 3 | 248 | 504 | 585 | MBM4776370.1 serine/threonine protein kinase [Archangiaceae bacterium] | diamond | 246 | 155 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangiaceae bacterium | |||
| 28083327 | 28083327 | PRJNA1218816_P_NODE_20605_length_482_cov_1.488998_g20172_i0 | PRJNA1218816 | 20605 | 482 | 1.488998 | 7.17697036 | Archangiaceae bacterium | 2684409 | Bacteria | Bacteria | 110 | 4.36e-25 | NR | MBK7864354.1 | 2684409 | g20172 | i0 | 33.8 | 0.995850622406639 | 160 | 102 | 99.6 | 1 | 480 | 1 | 126 | 281 | MBK7864354.1 hypothetical protein [Archangiaceae bacterium] | diamond | 480 | 110 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangiaceae bacterium | |||
| 28639144 | 28639144 | PRJNA1218816_P_NODE_60187_length_244_cov_0.900585_g59754_i0 | PRJNA1218816 | 60187 | 244 | 0.900585 | 2.1974274 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 49.7 | 1.29e-4 | NR | MDA8305962.1 | 2026735 | g59754 | i0 | 50.8 | 2.26229508196721 | 61 | 27 | 75 | 1 | 51 | 233 | 361 | 418 | MDA8305962.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 552 | 49.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30230660 | 30230660 | PRJNA1218816_P_NODE_59412_length_245_cov_0.895349_g58979_i0 | PRJNA1218816 | 59412 | 245 | 0.895349 | 2.19360505 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 120 | 9.55e-31 | NR | MCA9575668.1 | 2026763 | g58979 | i0 | 69.1 | 1.95918367346939 | 81 | 24 | 99.2 | 1 | 2 | 244 | 234 | 313 | MCA9575668.1 malate dehydrogenase [Myxococcales bacterium] | diamond | 480 | 120 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 31102396 | 31102396 | PRJNA1218816_P_NODE_39695_length_307_cov_1.055556_g39262_i0 | PRJNA1218816 | 39695 | 307 | 1.055556 | 3.24055692 | Archangiaceae | 39 | Bacteria | Bacteria | 118 | 2.57e-28 | NR | WP_013377870.1 | 41 | g39262 | i0 | 63.7 | 10.0065146579805 | 102 | 33 | 99.7 | 1 | 307 | 2 | 230 | 327 | WP_013377870.1 S8 family serine peptidase [Stigmatella aurantiaca] | diamond | 3072 | 119 | 0.991596638655462 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 31716220 | 31716220 | PRJNA1218816_P_NODE_61257_length_243_cov_0.905882_g60824_i0 | PRJNA1218816 | 61257 | 243 | 0.905882 | 2.20129326 | Labilithrix sp. | 1971228 | Bacteria | Bacteria | 102 | 2.659999999999999e-23 | NR | MBX3200829.1 | 1971228 | g60824 | i0 | 55 | 0.987654320987654 | 80 | 36 | 98.8 | 0 | 241 | 2 | 147 | 226 | MBX3200829.1 glycosyltransferase [Labilithrix sp.] | diamond | 240 | 102 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix sp. | |||
| 32064123 | 32064123 | PRJNA1218816_P_NODE_56398_length_248_cov_0.880000_g55965_i0 | PRJNA1218816 | 56398 | 248 | 0.88 | 2.1824 | Polyangiales bacterium | 3034171 | Bacteria | Bacteria | 152 | 6.62e-43 | NR | MFO0602477.1 | 3034171 | g55965 | i0 | 85.4 | 1.98387096774194 | 82 | 12 | 99.2 | 0 | 2 | 247 | 214 | 295 | MFO0602477.1 amidohydrolase family protein [Polyangiales bacterium] | diamond | 492 | 152 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiales bacterium | |||||
| 32254410 | 32254410 | PRJNA1218816_P_NODE_54838_length_250_cov_0.870056_g54405_i0 | PRJNA1218816 | 54838 | 250 | 0.870056 | 2.17514 | Sandaracinaceae bacterium | 2510337 | Bacteria | Bacteria | 87.4 | 1.83e-18 | NR | MBX7191176.1 | 2510337 | g54405 | i0 | 67.2 | 0.696 | 58 | 19 | 69.6 | 0 | 1 | 174 | 236 | 293 | MBX7191176.1 response regulator [Sandaracinaceae bacterium] | diamond | 174 | 87.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;