RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1218816", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1218816 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16910713 16910713 PRJNA1218816_P_NODE_62914_length_241_cov_0.916667_g62481_i0 PRJNA1218816 62914 241 0.916667 2.20916747 Brachionus plicatilis 10195 Rotifera other_Eukaryota 124 1.57e-34   NR RNA20071.1 10195 g62481 i0 81.8 0.95850622406639 77 14 95.9 0 241 11 36 112 RNA20071.1 40S ribosomal S25 [Brachionus plicatilis] diamond 231 124 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
17624047 17624047 PRJNA1218816_P_NODE_60934_length_243_cov_0.905882_g60501_i0 PRJNA1218816 60934 243 0.905882 2.20129326 Eurotatoria 2816136 Rotifera other_Eukaryota 449 6.65e-122   NTclustered gi|72153731|gb|DQ089739.1| 104782 g60501 i0 100 66.7283950617284 243 0 100 0 1 243 1677 1919 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 16215 449 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
28620338 28620338 PRJNA1218816_P_NODE_57367_length_247_cov_0.885057_g56934_i0 PRJNA1218816 57367 247 0.885057 2.18609079 Rotaria sordida 392033 Rotifera other_Eukaryota 81.3 9.33e-16   NR CAF1017888.1 392033 g56934 i0 48.2 1.03238866396761 85 34 92.3 2 230 3 256 339 CAF1017888.1 unnamed protein product [Rotaria sordida] diamond 255 81.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
32777949 32777949 PRJNA1218816_P_NODE_61680_length_242_cov_0.911243_g61247_i0 PRJNA1218816 61680 242 0.911243 2.20520806 Rotaria 231623 Rotifera other_Eukaryota 77.4 1.84e-14   NR CAF4411027.1 392030 g61247 i0 55.3 21.1735537190083 85 33 99.2 2 241 2 99 183 CAF4411027.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 5124 77.8 0.994858611825193 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;