contig_metadata
4 rows where bioproject = "PRJNA1218816", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 333500 | 333500 | PRJNA1218816_P_NODE_58541_length_246_cov_0.890173_g58108_i0 | PRJNA1218816 | 58541 | 246 | 0.890173 | 2.18982558 | Bursaphelenchus xylophilus | 6326 | Nematoda | Nematoda | 99.8 | 7.03e-24 | NR | CAD5209403.1 | 6326 | g58108 | i0 | 66.2 | 0.939024390243902 | 77 | 26 | 93.9 | 0 | 1 | 231 | 98 | 174 | CAD5209403.1 unnamed protein product [Bursaphelenchus xylophilus] | diamond | 231 | 99.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Bursaphelenchus | Bursaphelenchus xylophilus | |
| 6711263 | 6711263 | PRJNA1218816_P_NODE_52486_length_255_cov_1.494505_g52053_i0 | PRJNA1218816 | 52486 | 255 | 1.494505 | 3.81098775 | Halicephalobus sp. NKZ332 | 2598192 | Nematoda | Nematoda | 127 | 1.03e-32 | NR | KAE9555523.1 | 2598192 | g52053 | i0 | 77.5 | 4.70588235294118 | 80 | 18 | 94.1 | 0 | 2 | 241 | 327 | 406 | KAE9555523.1 hypothetical protein FO519_001291 [Halicephalobus sp. NKZ332] | diamond | 1200 | 127 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Panagrolaimidae | Halicephalobus | Halicephalobus sp. NKZ332 | |
| 14362263 | 14362263 | PRJNA1218816_P_NODE_22912_length_446_cov_1.932976_g22479_i0 | PRJNA1218816 | 22912 | 446 | 1.932976 | 8.62107296 | Opisthokonta | 33154 | Nematoda | Nematoda | 187 | 3.9299999999999995e-56 | NR | EJW87624.1 | 6293 | g22479 | i0 | 70 | 44.2735426008969 | 130 | 39 | 87.4 | 0 | 55 | 444 | 117 | 246 | EJW87624.1 60S ribosomal protein L12 [Wuchereria bancrofti] | diamond | 19746 | 187 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Wuchereria | Wuchereria bancrofti | |
| 15636262 | 15636262 | PRJNA1218816_P_NODE_35633_length_329_cov_1.199219_g35200_i0 | PRJNA1218816 | 35633 | 329 | 1.199219 | 3.94543051 | Metazoa | 33208 | Nematoda | Nematoda | 147 | 5.74e-39 | NR | KRY35830.1 | 6334 | g35200 | i0 | 63.2 | 8.66261398176292 | 106 | 38 | 95.7 | 1 | 327 | 13 | 212 | 317 | KRY35830.1 60S ribosomal protein L5 [Trichinella spiralis] | diamond | 2850 | 148 | 0.993243243243243 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Enoplea | Trichinellida | Trichinellidae | Trichinella | Trichinella spiralis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;