RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1218816", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1218816 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4160213 4160213 PRJNA1218816_P_NODE_16324_length_570_cov_1.442656_g15897_i0 PRJNA1218816 16324 570 1.442656 8.2231392 root 1 Root_unresolved Root_unresolved 307 4.05e-103   NR CAH1778036.1 6347 g15897 i0 81.9 94.9578947368421 188 34 98.9 0 564 1 9 196 CAH1778036.1 unnamed protein product, partial [Owenia fusiformis] diamond 54126 309 0.993527508090615 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
7986870 7986870 PRJNA1218816_P_NODE_52107_length_256_cov_1.688525_g51674_i0 PRJNA1218816 52107 256 1.688525 4.322624 Pristina aequiseta 212339 Annelida Annelida 350 7.37e-92   NTclustered gi|285029437|gb|GQ355455.1| 212339 g51674 i0 91.473 96.0234375 258 16 100 5 1 256 328 581 Pristina aequiseta 28S ribosomal RNA gene, partial sequence blastn 24582 350 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Pristina Pristina aequiseta
18184966 18184966 PRJNA1218816_P_NODE_45615_length_281_cov_1.447115_g45182_i0 PRJNA1218816 45615 281 1.447115 4.06639315 Hirudo verbana 311461 Annelida Annelida 65.8 3.33e-6   NTclustered gi|2918369621|emb|OZ237783.1| 311461 g45182 i0 84.615 4.18861209964413 65 10 23 0 67 131 11991686 11991750 Hirudo verbana genome assembly, chromosome: 5 blastn 1177 65.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
32809537 32809537 PRJNA1218816_P_NODE_62200_length_242_cov_0.911243_g61767_i0 PRJNA1218816 62200 242 0.911243 2.20520806 Metazoa 33208 Annelida Annelida 44.7 0.00773   NR KAK2173121.1 27915 g61767 i0 71.4 2.47933884297521 28 8 34.7 0 241 158 346 373 KAK2173121.1 hypothetical protein NP493_901g00090 [Ridgeia piscesae] diamond 600 44.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;