contig_metadata
13 rows where bioproject = "PRJNA1218816", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1046205 | 1046205 | PRJNA1218816_P_NODE_13521_length_652_cov_7.386874_g13101_i0 | PRJNA1218816 | 13521 | 652 | 7.386874 | 48.16241848 | Thalassiosira | 35127 | SAR_Eukaryotes | SAR_Eukaryotes | 1171 | 0 | NTclustered | gi|2862228846|gb|PQ645480.1| | 1048533 | g13101 | i0 | 99.08 | 100.19018404908 | 652 | 6 | 100 | 0 | 1 | 652 | 3522 | 4173 | Thalassiosira bioculata isolate AGSB0307 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 65324 | 1171 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Thalassiosiraceae | Thalassiosira | Thalassiosira bioculata | ||
| 2884437 | 2884437 | PRJNA1218816_P_NODE_58023_length_246_cov_1.393064_g57590_i0 | PRJNA1218816 | 58023 | 246 | 1.393064 | 3.42693744 | Mayamaea pseudoterrestris | 2872254 | SAR_Eukaryotes | SAR_Eukaryotes | 138 | 2.67e-36 | NR | GKY98155.1 | 2872254 | g57590 | i0 | 79 | 0.98780487804878 | 81 | 17 | 98.8 | 0 | 245 | 3 | 148 | 228 | GKY98155.1 Inositol monophosphatase 2 [Mayamaea pseudoterrestris] | diamond | 243 | 138 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Naviculaceae | Mayamaea | Mayamaea pseudoterrestris | ||
| 4874386 | 4874386 | PRJNA1218816_P_NODE_45824_length_280_cov_1.487923_g45391_i0 | PRJNA1218816 | 45824 | 280 | 1.487923 | 4.1661844 | Thalassiosirales | 33847 | SAR_Eukaryotes | SAR_Eukaryotes | 433 | 7.89e-117 | NTclustered | gi|74325165|ref|NC_007405.1| | 35128 | g45391 | i0 | 95.255 | 99.4571428571429 | 274 | 12 | 98 | 1 | 7 | 280 | 12492 | 12220 | Thalassiosira pseudonana mitochondrion, complete genome | blastn | 27848 | 435 | 0.995402298850575 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Thalassiosiraceae | Thalassiosira | Thalassiosira pseudonana | ||
| 6711384 | 6711384 | PRJNA1218816_P_NODE_64326_length_210_cov_5.211679_g63893_i0 | PRJNA1218816 | 64326 | 210 | 5.211679 | 10.9445259 | Cyclotella cryptica | 29204 | SAR_Eukaryotes | SAR_Eukaryotes | 292 | 9.97e-75 | NTclustered | gi|1169296927|gb|KY364697.1| | 29204 | g63893 | i0 | 91.905 | 93.6857142857143 | 210 | 15 | 100 | 2 | 1 | 210 | 5607 | 5814 | Cyclotella cryptica 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 19674 | 292 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Stephanodiscales | Stephanodiscaceae | Cyclotella | Cyclotella cryptica | ||
| 7987003 | 7987003 | PRJNA1218816_P_NODE_8047_length_953_cov_1.629545_g7710_i0 | PRJNA1218816 | 8047 | 953 | 1.629545 | 15.52956385 | Phaeodactylum tricornutum CCAP 1 | 2850 | SAR_Eukaryotes | SAR_Eukaryotes | 350 | 2.039999999999999e-118 | NR | XP_002181180.1 | 556484 | g7710 | i0 | 79.2 | 6.32423924449108 | 212 | 44 | 66.7 | 0 | 927 | 292 | 6 | 217 | XP_002181180.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] | diamond | 6027 | 350 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Phaeodactylaceae | Phaeodactylum | Phaeodactylum tricornutum | ||
| 8699265 | 8699265 | PRJNA1218816_P_NODE_32867_length_346_cov_2.853480_g32434_i0 | PRJNA1218816 | 32867 | 346 | 2.85348 | 9.8730408 | Thalassiosira | 35127 | SAR_Eukaryotes | SAR_Eukaryotes | 634 | 2.5599999999999996e-177 | NTclustered | gi|675821511|dbj|AB827536.1| | 137771 | g32434 | i0 | 99.711 | 100.014450867052 | 346 | 1 | 100 | 0 | 1 | 346 | 452 | 107 | Uncultured diatom gene for 18S rRNA, partial sequence, clone: HP18D-93 | blastn | 34605 | 640 | 0.990625 | Eukaryota | Sar | Bacillariophyta | uncultured diatom | ||||||
| 20734662 | 20734662 | PRJNA1218816_P_NODE_15397_length_595_cov_2.632184_g14972_i0 | PRJNA1218816 | 15397 | 595 | 2.632184 | 15.6614948 | Phaeodactylum tricornutum | 2850 | SAR_Eukaryotes | SAR_Eukaryotes | 313 | 2.45e-80 | NTclustered | gi|657012367|gb|KF302531.1| | 2850 | g14972 | i0 | 83.832 | 25.236974789916 | 334 | 48 | 56 | 6 | 1 | 331 | 346 | 16 | Phaeodactylum tricornutum clone C443 40S ribosomal protein mRNA, partial cds | blastn | 15016 | 313 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Phaeodactylaceae | Phaeodactylum | Phaeodactylum tricornutum | ||
| 20734812 | 20734812 | PRJNA1218816_P_NODE_38697_length_312_cov_1.196653_g38264_i0 | PRJNA1218816 | 38697 | 312 | 1.196653 | 3.73355736 | Seminavis robusta | 568900 | SAR_Eukaryotes | SAR_Eukaryotes | 152 | 3.86e-40 | NR | CAB9501098.1 | 568900 | g38264 | i0 | 76 | 1 | 104 | 24 | 100 | 1 | 1 | 312 | 335 | 437 | CAB9501098.1 NAD(P) transhydrogenase [Seminavis robusta] | diamond | 312 | 152 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Naviculaceae | Seminavis | Seminavis robusta | ||
| 22723178 | 22723178 | PRJNA1218816_P_NODE_45038_length_283_cov_1.466667_g44605_i0 | PRJNA1218816 | 45038 | 283 | 1.466667 | 4.15066761 | Chaetoceros tenuissimus | 426638 | SAR_Eukaryotes | SAR_Eukaryotes | 120 | 1.6699999999999998e-32 | NR | GFH58943.1 | 426638 | g44605 | i0 | 74.7 | 0.92226148409894 | 87 | 22 | 92.2 | 0 | 21 | 281 | 25 | 111 | GFH58943.1 hypothetical protein CTEN210_15419 [Chaetoceros tenuissimus] | diamond | 261 | 120 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Chaetocerotales | Chaetocerotaceae | Chaetoceros | Chaetoceros tenuissimus | ||
| 23285816 | 23285816 | PRJNA1218816_P_NODE_62459_length_241_cov_1.375000_g62026_i0 | PRJNA1218816 | 62459 | 241 | 1.375 | 3.31375 | Thalassiosira pseudonana | 35128 | SAR_Eukaryotes | SAR_Eukaryotes | 165 | 2.67e-36 | NTclustered | gi|224002558|ref|XM_002290915.1| | 296543 | g62026 | i0 | 80.444 | 73.3983402489627 | 225 | 36 | 92 | 5 | 1 | 221 | 166 | 386 | Thalassiosira pseudonana CCMP1335 hypothetical protein (AHC3), mRNA | blastn | 17689 | 165 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Thalassiosiraceae | Thalassiosira | Thalassiosira pseudonana | ||
| 23998396 | 23998396 | PRJNA1218816_P_NODE_59179_length_245_cov_0.895349_g58746_i0 | PRJNA1218816 | 59179 | 245 | 0.895349 | 2.19360505 | Thalassiosira | 35127 | SAR_Eukaryotes | SAR_Eukaryotes | 453 | 5.1900000000000006e-123 | NTclustered | gi|98990570|gb|DQ514795.1| | 160265 | g58746 | i0 | 100 | 99.6979591836735 | 245 | 0 | 100 | 0 | 1 | 245 | 26 | 270 | Thalassiosira antarctica strain CCMP982 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast | blastn | 24426 | 453 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Thalassiosiraceae | Thalassiosira | Thalassiosira antarctica | ||
| 27862290 | 27862290 | PRJNA1218816_P_NODE_52345_length_255_cov_2.263736_g51912_i0 | PRJNA1218816 | 52345 | 255 | 2.263736 | 5.7725268 | Cyclostephanos tholiformis | 382380 | SAR_Eukaryotes | SAR_Eukaryotes | 110 | 8.84e-26 | NR | KAL3808413.1 | 382380 | g51912 | i0 | 65.5 | 1.97647058823529 | 84 | 29 | 98.8 | 0 | 255 | 4 | 626 | 709 | KAL3808413.1 hypothetical protein ACHAXA_001350 [Cyclostephanos tholiformis] | diamond | 504 | 110 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Stephanodiscales | Stephanodiscaceae | Cyclostephanos | Cyclostephanos tholiformis | ||
| 29883343 | 29883343 | PRJNA1218816_P_NODE_49631_length_265_cov_1.526042_g49198_i0 | PRJNA1218816 | 49631 | 265 | 1.526042 | 4.0440113 | Skeletonema marinoi | 267567 | SAR_Eukaryotes | SAR_Eukaryotes | 165 | 4.7e-47 | NR | KAK1739474.1 | 267567 | g49198 | i0 | 85.2 | 8.92075471698113 | 88 | 13 | 99.6 | 0 | 264 | 1 | 246 | 333 | KAK1739474.1 fucoxanthin-chlorophyll a-c binding protein [Skeletonema marinoi] | diamond | 2364 | 165 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemataceae | Skeletonema | Skeletonema marinoi |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;