contig_metadata
8 rows where bioproject = "PRJNA1218816", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4160575 | 4160575 | PRJNA1218816_P_NODE_60044_length_244_cov_0.900585_g59611_i0 | PRJNA1218816 | 60044 | 244 | 0.900585 | 2.1974274 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 134 | 1.63e-38 | NR | RYD67074.1 | 2026800 | g59611 | i0 | 88.5 | 0.959016393442623 | 78 | 8 | 95.9 | 1 | 5 | 238 | 15 | 91 | RYD67074.1 MAG: J domain-containing protein, partial [Verrucomicrobiaceae bacterium] | diamond | 234 | 134 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 9974361 | 9974361 | PRJNA1218816_P_NODE_52588_length_255_cov_1.148352_g52155_i0 | PRJNA1218816 | 52588 | 255 | 1.148352 | 2.9282976 | Bacteria | 2 | Bacteria | Bacteria | 322 | 1.6e-83 | NTclustered | gi|2518556548|emb|OX638380.1| | 412056 | g52155 | i0 | 89.764 | 152.670588235294 | 254 | 22 | 99 | 3 | 1 | 253 | 3921429 | 3921679 | MAG: uncultured Verrucomicrobiae bacterium isolate efd5e50e-5b6a-4a0f-a0a2-e496bae301b3 genome assembly, chromosome: 1 | blastn | 38931 | 324 | 0.993827160493827 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10537383 | 10537383 | PRJNA1218816_P_NODE_56389_length_248_cov_0.880000_g55956_i0 | PRJNA1218816 | 56389 | 248 | 0.88 | 2.1824 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 159 | 1.28e-34 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g55956 | i0 | 78.431 | 36.4072580645161 | 255 | 47 | 100 | 8 | 1 | 248 | 2749712 | 2749459 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 9029 | 159 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14362609 | 14362609 | PRJNA1218816_P_NODE_63112_length_241_cov_0.916667_g62679_i0 | PRJNA1218816 | 63112 | 241 | 0.916667 | 2.20916747 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 411 | 3.109999999999999e-110 | NTclustered | gi|403081880|gb|JX240789.1| | 156588 | g62679 | i0 | 97.51 | 99.8921161825726 | 241 | 5 | 100 | 1 | 1 | 241 | 1426 | 1187 | Uncultured Verrucomicrobia bacterium clone MLS125 16S ribosomal RNA gene, partial sequence | blastn | 24074 | 411 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 22723210 | 22723210 | PRJNA1218816_P_NODE_59558_length_245_cov_0.895349_g59125_i0 | PRJNA1218816 | 59558 | 245 | 0.895349 | 2.19360505 | Coraliomargarita | 442430 | Bacteria | Bacteria | 191 | 4.49e-44 | NTclustered | gi|470486190|ref|NR_076741.1| | 395922 | g59125 | i0 | 81.048 | 166.216326530612 | 248 | 40 | 100 | 6 | 1 | 245 | 1714 | 1471 | Coraliomargarita akajimensis strain 04OKA010-24 23S ribosomal RNA gene, complete sequence | blastn | 40723 | 191 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Coraliomargaritaceae | Coraliomargarita | Coraliomargarita akajimensis | |
| 27420606 | 27420606 | PRJNA1218816_P_NODE_53443_length_252_cov_0.821229_g53010_i0 | PRJNA1218816 | 53443 | 252 | 0.821229 | 2.06949708 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42.4 | 0.0407 | NR | MEI6341235.1 | 2026799 | g53010 | i0 | 35.5 | 0.904761904761905 | 76 | 40 | 79.8 | 2 | 42 | 242 | 84 | 159 | MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] | diamond | 228 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28102030 | 28102030 | PRJNA1218816_P_NODE_54725_length_250_cov_0.870056_g54292_i0 | PRJNA1218816 | 54725 | 250 | 0.870056 | 2.17514 | Prosthecobacter | 48463 | Bacteria | Bacteria | 154 | 5.79e-42 | NR | WP_184341396.1 | 48466 | g54292 | i0 | 90.4 | 10.956 | 83 | 8 | 99.6 | 0 | 2 | 250 | 394 | 476 | WP_184341396.1 M3 family oligoendopeptidase [Prosthecobacter vanneervenii] | diamond | 2739 | 155 | 0.993548387096774 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 30660209 | 30660209 | PRJNA1218816_P_NODE_56913_length_248_cov_0.880000_g56480_i0 | PRJNA1218816 | 56913 | 248 | 0.88 | 2.1824 | Bacteria | 2 | Bacteria | Bacteria | 89.4 | 1.56e-18 | NR | RYD84082.1 | 2026800 | g56480 | i0 | 55.6 | 1.94758064516129 | 81 | 34 | 98 | 1 | 6 | 248 | 328 | 406 | RYD84082.1 MAG: hypothetical protein EOP84_06490, partial [Verrucomicrobiaceae bacterium] | diamond | 483 | 90.1 | 0.992230854605993 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;