RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1215813" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1215813 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10535667 10535667 PRJNA1215813_P_NODE_8589_length_266_cov_1.284974_g8509_i0 PRJNA1215813 8589 266 1.284974 3.41803084 Rozella allomycis CSF55 988480 Fungi Fungi 134 7.98e-35   NR EPZ31733.1 988480 g8509 i0 76.1 3.94736842105263 88 21 99.2 0 2 265 188 275 EPZ31733.1 T-complex protein 1 subunit gamma [Rozella allomycis CSF55] diamond 1050 134 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28588770 28588770 PRJNA1215813_P_NODE_6547_length_306_cov_1.334764_g6467_i0 PRJNA1215813 6547 306 1.334764 4.08437784 Rozella allomycis CSF55 988480 Fungi Fungi 58.2 1.93e-8   NR EPZ31580.1 988480 g6467 i0 55.8 1.09803921568627 52 22 50 1 2 154 17 68 EPZ31580.1 60S acidic ribosomal protein P1-alpha 1 [Rozella allomycis CSF55] diamond 336 58.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28746441 28746441 PRJNA1215813_P_NODE_10787_length_248_cov_0.891429_g10707_i0 PRJNA1215813 10787 248 0.891429 2.21074392 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 59.3 5.7e-8   NR PJF19891.1 1246581 g10707 i0 32.9 0.991935483870968 82 55 99.2 0 248 3 347 428 PJF19891.1 hypothetical protein PSACC_00279, partial [Paramicrosporidium saccamoebae] diamond 246 59.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;