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contig_metadata

7 rows where bioproject = "PRJNA1215813" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 7 ✖

bioproject 1

  • PRJNA1215813 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1045810 1045810 PRJNA1215813_P_NODE_6821_length_300_cov_1.123348_g6741_i0 PRJNA1215813 6821 300 1.123348 3.370044 Haloterrigena 121871 Archaea Archaea 52.8 0.028   NTclustered gi|1988313350|gb|CP069188.1| 2675099 g6741 i0 96.875 0.213333333333333 32 0 10 1 256 286 621354 621323 Haloterrigena salifodinae strain BOL5-1 chromosome, complete genome blastn 64 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Haloterrigena Haloterrigena salifodinae
9259784 9259784 PRJNA1215813_P_NODE_7608_length_285_cov_1.103774_g7528_i0 PRJNA1215813 7608 285 1.103774 3.1457559 Candidatus Aciduliprofundum boonei 379547 Archaea Archaea 52.8 0.026   NTclustered gi|289533465|gb|CP001941.1| 439481 g7528 i0 100 0.0982456140350877 28 0 10 0 86 113 574992 574965 Aciduliprofundum boonei T469, complete genome blastn 28 52.8 1 Archaea DHVE2 group Methanobacteriati Thermoplasmatota       Candidatus Aciduliprofundum Candidatus Aciduliprofundum boonei
28399147 28399147 PRJNA1215813_P_NODE_6426_length_309_cov_0.860169_g6346_i0 PRJNA1215813 6426 309 0.860169 2.65792221 Methanomicrobiales archaeon 2184052 Archaea Archaea 43.9 0.0237   NR MDD1665018.1 2184052 g6346 i0 32.1 0.815533980582524 84 56 80.6 1 24 272 53 136 MDD1665018.1 SufD family Fe-S cluster assembly protein [Methanomicrobiales archaeon] diamond 252 43.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
29283041 29283041 PRJNA1215813_P_NODE_1089_length_695_cov_2.003215_g1015_i0 PRJNA1215813 1089 695 2.003215 13.92234425 Methanobacterium lacus 877455 Archaea Archaea 49.7 0.00206   NR WP_013645769.1 877455 g1015 i0 21.4 0.686330935251799 159 106 66.9 7 75 539 6 149 WP_013645769.1 hypothetical protein [Methanobacterium lacus] diamond 477 49.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium lacus
30439237 30439237 PRJNA1215813_P_NODE_793_length_784_cov_5.942335_g728_i0 PRJNA1215813 793 784 5.942335 46.5879064 Haladaptatus 367188 Archaea Archaea 108 1.1499999999999999e-23   NR WP_244895571.1 367189 g728 i0 35.7 2.99234693877551 196 120 73.1 4 732 160 20 214 WP_244895571.1 DUF4397 domain-containing protein [Haladaptatus paucihalophilus] diamond 2346 108 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus paucihalophilus
30755051 30755051 PRJNA1215813_P_NODE_1034_length_709_cov_3.187107_g961_i0 PRJNA1215813 1034 709 3.187107 22.59658863 Haladaptatus 367188 Archaea Archaea 91.7 3.19e-17   NR PSP63795.1 1919162 g961 i0 28 5.8984485190409 211 141 85.5 5 647 42 296 504 PSP63795.1 MAG: hypothetical protein BRC77_05875 [Halobacteriales archaeon QH_8_64_26] diamond 4182 92.4 0.992424242424242 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon QH_8_64_26
31766584 31766584 PRJNA1215813_P_NODE_2157_length_505_cov_2.030093_g2077_i0 PRJNA1215813 2157 505 2.030093 10.25196965 root 1 Root_unresolved Root_unresolved 79.7 8.82e-14   NR OPX78749.1 1811685 g2077 i0 53.9 2.57821782178218 89 33 52.3 4 502 239 1695 1776 OPX78749.1 MAG: HYR domain protein [Methanosaeta sp. PtaB.Bin039] diamond 1302 80.1 0.995006242197254 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanosaeta sp. PtaB.Bin039

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;