RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA1215813", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 10 ✖

tax_kingdom 1

  • Metazoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA1215813 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4873943 4873943 PRJNA1215813_P_NODE_4264_length_370_cov_2.101010_g4184_i0 PRJNA1215813 4264 370 2.10101 7.773737 Metazoa 33208 Platyhelminthes Platyhelminthes 219 7.6e-67   NR XP_009164529.1 6198 g4184 i0 80.5 150.575675675676 123 24 99.7 0 369 1 2 124 XP_009164529.1 hypothetical protein T265_02106 [Opisthorchis viverrini] diamond 55713 221 0.990950226244344 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
7985245 7985245 PRJNA1215813_P_NODE_9247_length_253_cov_1.644444_g9167_i0 PRJNA1215813 9247 253 1.644444 4.16044332 Monotoplana cf. diorchis 104924 Platyhelminthes Platyhelminthes 73.1 1.76e-8   NTclustered gi|10944981|emb|AJ270174.1| 104924 g9167 i0 100 14.7944664031621 39 0 15 0 61 99 1633 1595 Monotoplana cf. diorchis partial 28S rRNA gene blastn 3743 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Monotoplanidae Monotoplana Monotoplana cf. diorchis
9259804 9259804 PRJNA1215813_P_NODE_8828_length_261_cov_2.489362_g8748_i0 PRJNA1215813 8828 261 2.489362 6.49723482 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 460 3.3399999999999995e-125   NTclustered gi|68479954|gb|DQ076149.1| 6182 g8748 i0 98.467 1 261 4 100 0 1 261 41 301 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 261 460 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
27198884 27198884 PRJNA1215813_P_NODE_9562_length_252_cov_0.871508_g9482_i0 PRJNA1215813 9562 252 0.871508 2.19620016 Clonorchis sinensis 79923 Platyhelminthes Platyhelminthes 44.3 0.0116   NR GAA48294.1 79923 g9482 i0 33.8 0.845238095238095 71 45 82.1 1 226 20 80 150 GAA48294.1 hypothetical protein CLF_101429 [Clonorchis sinensis] diamond 213 44.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Clonorchis Clonorchis sinensis
27281252 27281252 PRJNA1215813_P_NODE_10783_length_248_cov_0.891429_g10703_i0 PRJNA1215813 10783 248 0.891429 2.21074392 Metazoa 33208 Platyhelminthes Platyhelminthes 70.9 4.92e-12   NR XP_009162149.1 6198 g10703 i0 43 36.7983870967742 79 40 89.5 2 248 27 592 670 XP_009162149.1 hypothetical protein T265_00177 [Opisthorchis viverrini] diamond 9126 71.6 0.990223463687151 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
27420591 27420591 PRJNA1215813_P_NODE_11883_length_244_cov_0.912281_g11803_i0 PRJNA1215813 11883 244 0.912281 2.22596564 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 105 1.5999999999999999e-24   NR PAA76525.1 282301 g11803 i0 61.3 1.9672131147541 80 31 98.4 0 2 241 254 333 PAA76525.1 hypothetical protein BOX15_Mlig016081g3 [Macrostomum lignano] diamond 480 105 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28986512 28986512 PRJNA1215813_P_NODE_11848_length_244_cov_0.912281_g11768_i0 PRJNA1215813 11848 244 0.912281 2.22596564 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.5 1.4e-12   NR PAA54799.1 282301 g11768 i0 62.5 2.82786885245902 56 20 67.6 1 76 240 15 70 PAA54799.1 hypothetical protein BOX15_Mlig010068g3 [Macrostomum lignano] diamond 690 70.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
29365230 29365230 PRJNA1215813_P_NODE_11489_length_245_cov_2.267442_g11409_i0 PRJNA1215813 11489 245 2.267442 5.5552329 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 96.3 5.550000000000001e-21   NR VDM33619.1 6205 g11409 i0 53.7 13.7877551020408 82 37 99.2 1 245 3 126 207 VDM33619.1 unnamed protein product [Hydatigera taeniaeformis] diamond 3378 97.1 0.991761071060762 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Hydatigera Hydatigera taeniaeformis
29661650 29661650 PRJNA1215813_P_NODE_10490_length_249_cov_0.886364_g10410_i0 PRJNA1215813 10490 249 0.886364 2.20704636 Schistocephalus solidus 70667 Platyhelminthes Platyhelminthes 46.6 0.0018   NR VDM01867.1 70667 g10410 i0 36.5 3.19277108433735 63 34 75.9 2 225 37 253 309 VDM01867.1 unnamed protein product [Schistocephalus solidus] diamond 795 46.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Schistocephalus Schistocephalus solidus
32696283 32696283 PRJNA1215813_P_NODE_8060_length_276_cov_1.536946_g7980_i0 PRJNA1215813 8060 276 1.536946 4.24197096 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 43.5 0.0295   NR PAA86220.1 282301 g7980 i0 45.2 0.456521739130435 42 23 45.7 0 171 46 76 117 PAA86220.1 hypothetical protein BOX15_Mlig009159g3 [Macrostomum lignano] diamond 126 43.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;