RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJNA1215813", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 11 ✖

tax_kingdom 1

  • Metazoa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1215813 · 11 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
331654 331654 PRJNA1215813_P_NODE_3341_length_416_cov_0.909621_g3261_i0 PRJNA1215813 3341 416 0.909621 3.78402336 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 224 8.940000000000001e-70   NR CAH1773646.1 6347 g3261 i0 81.5 42.8725961538462 135 25 97.4 0 415 11 43 177 CAH1773646.1 unnamed protein product [Owenia fusiformis] diamond 17835 226 0.991150442477876 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
331733 331733 PRJNA1215813_P_NODE_7761_length_282_cov_1.258373_g7681_i0 PRJNA1215813 7761 282 1.258373 3.54861186 Metazoa 33208 Annelida Annelida 84.7 9.54e-17   NR CAH1794945.1 6347 g7681 i0 59.7 6.13829787234043 72 29 76.6 0 281 66 59 130 CAH1794945.1 unnamed protein product [Owenia fusiformis] diamond 1731 85.1 0.995299647473561 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
7985166 7985166 PRJNA1215813_P_NODE_3987_length_382_cov_1.449838_g3907_i0 PRJNA1215813 3987 382 1.449838 5.53838116 Paralvinella palmiformis 53620 Annelida Annelida 127 4.929999999999999e-31   NR KAK2143648.1 53620 g3907 i0 50.4 6 131 59 99.7 4 381 1 416 544 KAK2143648.1 hypothetical protein LSH36_824g03044 [Paralvinella palmiformis] diamond 2292 127 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
13085460 13085460 PRJNA1215813_P_NODE_631_length_868_cov_12.495597_g573_i0 PRJNA1215813 631 868 12.495597 108.46178196 Metazoa 33208 Annelida Annelida 304 2.12e-99   NR KAK2146210.1 53620 g573 i0 69.2 14.9066820276498 208 64 71.9 0 845 222 6 213 KAK2146210.1 hypothetical protein LSH36_624g01057 [Paralvinella palmiformis] diamond 12939 305 0.99672131147541 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
16908985 16908985 PRJNA1215813_P_NODE_954_length_733_cov_2.284848_g881_i0 PRJNA1215813 954 733 2.284848 16.74793584 Metazoa 33208 Annelida Annelida 217 8.34e-65   NR CAH1773728.1 6347 g881 i0 44.1 21.1023192360164 238 127 95 2 38 733 165 402 CAH1773728.1 unnamed protein product, partial [Owenia fusiformis] diamond 15468 217 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
27028249 27028249 PRJNA1215813_P_NODE_2702_length_459_cov_1.505181_g2622_i0 PRJNA1215813 2702 459 1.505181 6.90878079 root 1 Root_unresolved Root_unresolved 53.5 6.51e-5   NR KAK2179886.1 27915 g2622 i0 40 1.80392156862745 65 30 36.6 2 3 170 1704 1768 KAK2179886.1 hypothetical protein NP493_468g02010 [Ridgeia piscesae] diamond 828 53.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
27420593 27420593 PRJNA1215813_P_NODE_1963_length_531_cov_1.853712_g1883_i0 PRJNA1215813 1963 531 1.853712 9.84321072 Lamellibrachia satsuma 104711 Annelida Annelida 48.5 0.0064   NR KAI0212806.1 104711 g1883 i0 42.9 0.949152542372881 84 43 45.8 3 525 283 1088 1169 KAI0212806.1 hypothetical protein LSAT2_002254 [Lamellibrachia satsuma] diamond 504 48.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
27755133 27755133 PRJNA1215813_P_NODE_4544_length_360_cov_1.087108_g4464_i0 PRJNA1215813 4544 360 1.087108 3.9135888 Metazoa 33208 Annelida Annelida 147 1.17e-41   NR CAH1772980.1 6347 g4464 i0 61.5 11.125 117 45 97.5 0 351 1 33 149 CAH1772980.1 unnamed protein product [Owenia fusiformis] diamond 4005 147 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31842562 31842562 PRJNA1215813_P_NODE_6037_length_317_cov_1.680328_g5957_i0 PRJNA1215813 6037 317 1.680328 5.32663976 Lamellibrachia satsuma 104711 Annelida Annelida 110 1.0400000000000002e-27   NR KAI0209783.1 104711 g5957 i0 54 3.69085173501577 100 46 94.6 0 5 304 52 151 KAI0209783.1 Transcription initiation factor TFIID subunit 13 [Lamellibrachia satsuma] diamond 1170 110 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
32620602 32620602 PRJNA1215813_P_NODE_3600_length_401_cov_0.948171_g3520_i0 PRJNA1215813 3600 401 0.948171 3.80216571 Metazoa 33208 Annelida Annelida 108 4.79e-25   NR CAH1791596.1 6347 g3520 i0 45.7 6.56109725685786 116 62 86.8 1 348 1 109 223 CAH1791596.1 unnamed protein product [Owenia fusiformis] diamond 2631 108 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
32809530 32809530 PRJNA1215813_P_NODE_4040_length_380_cov_1.016287_g3960_i0 PRJNA1215813 4040 380 1.016287 3.8618906 Opisthokonta 33154 Annelida Annelida 195 1.5100000000000001e-59   NR XP_009019380.1 6412 g3960 i0 73.8 29.8421052631579 126 33 99.5 0 1 378 23 148 XP_009019380.1 hypothetical protein HELRODRAFT_94331 [Helobdella robusta] diamond 11340 196 0.994897959183674 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;