RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1215813", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1215813 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14360806 14360806 PRJNA1215813_P_NODE_6652_length_303_cov_2.713043_g6572_i0 PRJNA1215813 6652 303 2.713043 8.22052029 Pleistophora mulleri 249366 Fungi Fungi 346 1.16e-90   NTclustered gi|134147422|gb|EF119339.1| 249366 g6572 i0 87.459 25.2739273927393 303 34 99 3 3 303 2512 2212 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 7658 346 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
15073427 15073427 PRJNA1215813_P_NODE_6852_length_299_cov_1.380531_g6772_i0 PRJNA1215813 6852 299 1.380531 4.12778769 Nosematidae 27974 Fungi Fungi 265 3.28e-66   NTclustered gi|292987|gb|L13430.1|IHHRRNAGS 27976 g6772 i0 83.113 94.6020066889632 302 38 100 13 1 299 586 295 Ichthyosporidium giganteum small subunit ribosomal RNA gene, 3' end; nontranscribed spacer; and large subunit ribosomal RNA gene, 5' end blastn 28286 267 0.99250936329588 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Ichthyosporidium Ichthyosporidium giganteum
22008471 22008471 PRJNA1215813_P_NODE_5298_length_336_cov_1.186312_g5218_i0 PRJNA1215813 5298 336 1.186312 3.98600832 Ovipleistophora diplostomuri 2023159 Fungi Fungi 460 4.44e-125   NTclustered gi|2017842943|gb|MW811107.1| 2023159 g5218 i0 91.667 16.0327380952381 336 22 99 6 1 332 1112 1445 Ovipleistophora diplostomuri isolate 15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5387 460 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Ovipleistophora Ovipleistophora diplostomuri
29504132 29504132 PRJNA1215813_P_NODE_10170_length_250_cov_0.881356_g10090_i0 PRJNA1215813 10170 250 0.881356 2.20339 Vavraia culicis subsp. floridensis 948595 Fungi Fungi 112 2.04e-29   NR XP_008073290.1 948595 g10090 i0 72.3 0.996 83 22 98.4 1 248 3 18 100 XP_008073290.1 uncharacterized protein VCUG_00270 [Vavraia culicis subsp. floridensis] diamond 249 112 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;