RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA1215813", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1215813 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1606579 1606579 PRJNA1215813_P_NODE_8442_length_269_cov_1.295918_g8362_i0 PRJNA1215813 8442 269 1.295918 3.48601942 Paraphysoderma sedebokerense 1500003 Fungi Fungi 145 2.989999999999999e-38   NR KAI9137215.1 1500003 g8362 i0 76.4 5.96654275092937 89 21 99.3 0 269 3 134 222 KAI9137215.1 glycine cleavage system P-protein-domain-containing protein [Paraphysoderma sedebokerense] diamond 1605 145 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
23284014 23284014 PRJNA1215813_P_NODE_8739_length_263_cov_1.515789_g8659_i0 PRJNA1215813 8739 263 1.515789 3.98652507 Blastocladiella britannica 64508 Fungi Fungi 90.5 7.41e-19   NR KAI9222031.1 64508 g8659 i0 65.8 0.866920152091255 76 26 86.7 0 28 255 4 79 KAI9222031.1 P-loop containing nucleoside triphosphate hydrolase protein [Blastocladiella britannica] diamond 228 90.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
25271989 25271989 PRJNA1215813_P_NODE_2580_length_468_cov_2.101266_g2500_i0 PRJNA1215813 2580 468 2.101266 9.83392488 Catenaria anguillulae PL171 765915 Fungi Fungi 189 9.89e-59   NR ORZ32974.1 765915 g2500 i0 72.8 12.0576923076923 125 33 80.1 1 377 3 15 138 ORZ32974.1 eukaryotic translation initiation factor 5A-2, partial [Catenaria anguillulae PL171] diamond 5643 189 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
27830758 27830758 PRJNA1215813_P_NODE_10264_length_250_cov_0.881356_g10184_i0 PRJNA1215813 10264 250 0.881356 2.20339 Blastocladiella britannica 64508 Fungi Fungi 110 8.17e-26   NR KAI9222623.1 64508 g10184 i0 57.3 1.992 82 35 98.4 0 249 4 33 114 KAI9222623.1 hypothetical protein BC828DRAFT_16760 [Blastocladiella britannica] diamond 498 110 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
30483485 30483485 PRJNA1215813_P_NODE_10993_length_247_cov_0.896552_g10913_i0 PRJNA1215813 10993 247 0.896552 2.21448344 Paraphysoderma sedebokerense 1500003 Fungi Fungi 46.2 0.00224   NR KAI9137289.1 1500003 g10913 i0 44 2.31983805668016 50 28 60.7 0 9 158 384 433 KAI9137289.1 7 transmembrane sweet-taste receptor of 3 GCPR-domain-containing protein [Paraphysoderma sedebokerense] diamond 573 46.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
30989092 30989092 PRJNA1215813_P_NODE_574_length_904_cov_2.631769_g521_i0 PRJNA1215813 574 904 2.631769 23.79119176 Paraphysoderma sedebokerense 1500003 Fungi Fungi 197 8.139999999999998e-54   NR KAI9143020.1 1500003 g521 i0 49.8 14.7278761061947 217 90 68 2 903 289 343 552 KAI9143020.1 NUC091 domain-containing protein [Paraphysoderma sedebokerense] diamond 13314 197 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
31969191 31969191 PRJNA1215813_P_NODE_10238_length_250_cov_0.881356_g10158_i0 PRJNA1215813 10238 250 0.881356 2.20339 Catenaria anguillulae PL171 765915 Fungi Fungi 51.2 4.35e-5   NR ORZ38818.1 765915 g10158 i0 41 0.732 61 35 72 1 247 68 595 655 ORZ38818.1 hypothetical protein BCR44DRAFT_1427845 [Catenaria anguillulae PL171] diamond 183 51.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;