contig_metadata
5 rows where bioproject = "PRJNA1215813", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7985186 | 7985186 | PRJNA1215813_P_NODE_5467_length_331_cov_1.957364_g5387_i0 | PRJNA1215813 | 5467 | 331 | 1.957364 | 6.47887484 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 164 | 7.75e-49 | NR | HEY3782149.1 | 2682144 | g5387 | i0 | 71.6 | 21.7341389728097 | 109 | 31 | 98.8 | 0 | 3 | 329 | 66 | 174 | HEY3782149.1 CoA transferase subunit B [Fimbriimonadaceae bacterium] | diamond | 7194 | 164 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonadaceae bacterium | |||
| 21447702 | 21447702 | PRJNA1215813_P_NODE_5217_length_338_cov_1.132075_g5137_i0 | PRJNA1215813 | 5217 | 338 | 1.132075 | 3.8264135 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 422 | 2.11e-113 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g5137 | i0 | 89.381 | 143.786982248521 | 339 | 31 | 100 | 4 | 1 | 338 | 28703 | 28369 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 48600 | 422 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 28967630 | 28967630 | PRJNA1215813_P_NODE_1828_length_549_cov_1.964286_g1749_i0 | PRJNA1215813 | 1828 | 549 | 1.964286 | 10.78393014 | Fimbriimonas sp. | 1936159 | Bacteria | Bacteria | 70.1 | 1.3099999999999999e-10 | NR | HLO99943.1 | 1936159 | g1749 | i0 | 32.9 | 1.62841530054645 | 140 | 85 | 75.4 | 2 | 522 | 109 | 143 | 275 | HLO99943.1 collagen-binding domain-containing protein [Fimbriimonas sp.] | diamond | 894 | 70.1 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas sp. | ||
| 29030829 | 29030829 | PRJNA1215813_P_NODE_12588_length_242_cov_0.923077_g12508_i0 | PRJNA1215813 | 12588 | 242 | 0.923077 | 2.23384634 | Capsulimonas corticalis | 2219043 | Bacteria | Bacteria | 111 | 1.09e-26 | NR | WP_119324298.1 | 2219043 | g12508 | i0 | 65 | 0.991735537190083 | 80 | 28 | 99.2 | 0 | 1 | 240 | 1 | 80 | WP_119324298.1 glycoside hydrolase family 125 protein [Capsulimonas corticalis] | diamond | 240 | 111 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadia | Capsulimonadales | Capsulimonadaceae | Capsulimonas | Capsulimonas corticalis | ||
| 29819750 | 29819750 | PRJNA1215813_P_NODE_8351_length_271_cov_1.181818_g8271_i0 | PRJNA1215813 | 8351 | 271 | 1.181818 | 3.20272678 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 47.8 | 6.2e-4 | NR | HEX2952174.1 | 2033014 | g8271 | i0 | 36.5 | 0.575645756457565 | 52 | 33 | 57.6 | 0 | 262 | 107 | 48 | 99 | HEX2952174.1 ankyrin repeat domain-containing protein [Armatimonadota bacterium] | diamond | 156 | 47.8 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;