RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1215813", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA1215813 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27893864 27893864 PRJNA1215813_P_NODE_9605_length_252_cov_0.871508_g9525_i0 PRJNA1215813 9605 252 0.871508 2.19620016 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 66.2 2.2e-10   NR XP_068362353.1 1144522 g9525 i0 45.8 1.79761904761905 72 34 81 2 252 49 206 276 XP_068362353.1 CAMK family protein kinase [Tritrichomonas foetus] diamond 453 66.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28304375 28304375 PRJNA1215813_P_NODE_2406_length_480_cov_1.329238_g2326_i0 PRJNA1215813 2406 480 1.329238 6.3803424 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 186 1.07e-56   NR XP_068360038.1 1144522 g2326 i0 60.1 8.8375 153 61 95.6 0 22 480 5 157 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 4242 186 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;