RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1215813", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA1215813 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14360849 14360849 PRJNA1215813_P_NODE_9812_length_251_cov_1.567416_g9732_i0 PRJNA1215813 9812 251 1.567416 3.93421416 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 154 3.7299999999999985e-43   NR pir|S70637| 28003 g9732 i0 88 167.641434262948 83 10 99.2 0 1 249 145 227 pir|S70637| tubulin beta chain - Hexamita sp. (strain ATCC 50330) (fragment) [Hexamita sp.] diamond 42078 155 0.993548387096774 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita sp.
28039142 28039142 PRJNA1215813_P_NODE_6425_length_309_cov_0.966102_g6345_i0 PRJNA1215813 6425 309 0.966102 2.98525518 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.4 6.01e-7   NR CAK8748571.1 28002 g6345 i0 35.2 3.59223300970874 91 58 87.4 1 293 24 1696 1786 CAK8748571.1 HINF_038455 [Hexamita inflata] diamond 1110 57.8 0.993079584775087 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
28177873 28177873 PRJNA1215813_P_NODE_1306_length_641_cov_2.355634_g1229_i0 PRJNA1215813 1306 641 2.355634 15.09961394 Kipferlia bialata 797122 Fornicata other_Eukaryota 184 6.609999999999999e-55   NR GIQ80663.1 797122 g1229 i0 53.1 1.78783151326053 192 79 86.6 5 601 47 20 207 GIQ80663.1 glycoside hydrolase, family 25 [Kipferlia bialata] diamond 1146 184 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
32620603 32620603 PRJNA1215813_P_NODE_6980_length_296_cov_1.399103_g6900_i0 PRJNA1215813 6980 296 1.399103 4.14134488 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.1 2.96e-17   NR XP_001706428.1 5741 g6900 i0 54.9 9.81081081081081 71 32 72 0 84 296 1 71 XP_001706428.1 Dynein light chain LC8 [Giardia intestinalis] diamond 2904 80.5 0.995031055900621 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;