RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1215813", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1215813 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29504134 29504134 PRJNA1215813_P_NODE_11510_length_245_cov_1.726744_g11430_i0 PRJNA1215813 11510 245 1.726744 4.2305228 Fidelibacterota bacterium 2026760 Bacteria Bacteria 64.7 6.91e-11   NR HCK99969.1 2026760 g11430 i0 47.7 0.795918367346939 65 31 75.9 1 59 244 18 82 HCK99969.1 hypothetical protein [Fidelibacterota bacterium] diamond 195 64.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30736136 30736136 PRJNA1215813_P_NODE_6934_length_297_cov_1.392857_g6854_i0 PRJNA1215813 6934 297 1.392857 4.13678529 Fidelibacterota bacterium 2026760 Bacteria Bacteria 43.5 0.0229   NR MFH1214675.1 2026760 g6854 i0 33.3 0.848484848484849 84 40 74.7 4 22 243 4 81 MFH1214675.1 type II toxin-antitoxin system antitoxin SocA domain-containing protein [Fidelibacterota bacterium] diamond 252 43.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;