RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1215813", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1215813 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26914424 26914424 PRJNA1215813_P_NODE_3762_length_393_cov_0.915625_g3682_i0 PRJNA1215813 3762 393 0.915625 3.59840625 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 105 1.7199999999999995e-23   NR HWX21912.1 2838779 g3682 i0 46.9 0.99236641221374 130 64 96.2 2 390 13 505 633 HWX21912.1 HYR domain-containing protein [Candidatus Binatia bacterium] diamond 390 105 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28967634 28967634 PRJNA1215813_P_NODE_428_length_1012_cov_2.610224_g378_i0 PRJNA1215813 428 1012 2.610224 26.41546688 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 192 6.97e-52   NR MBY0276389.1 2838779 g378 i0 40.3 4.99209486166008 320 159 90.1 9 921 10 36 339 MBY0276389.1 hypothetical protein [Candidatus Binatia bacterium] diamond 5052 192 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29914926 29914926 PRJNA1215813_P_NODE_3831_length_389_cov_0.987342_g3751_i0 PRJNA1215813 3831 389 0.987342 3.84076038 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 112 1.18e-26   NR MFN2376773.1 2838779 g3751 i0 51.6 0.956298200514139 124 52 91 5 8 361 24 145 MFN2376773.1 hypothetical protein [Candidatus Binatia bacterium] diamond 372 112 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31779319 31779319 PRJNA1215813_P_NODE_1577_length_591_cov_2.283784_g1500_i0 PRJNA1215813 1577 591 2.283784 13.49716344 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 148 4.91e-41   NR MET0151620.1 2838779 g1500 i0 47.1 1.91370558375635 187 93 91.9 3 563 21 8 194 MET0151620.1 glutathione S-transferase [Candidatus Binatia bacterium] diamond 1131 148 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;