RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1215774", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1215774 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2882611 2882611 PRJNA1215774_P_NODE_9363_length_718_cov_1.776744_g9062_i0 PRJNA1215774 9363 718 1.776744 12.75702192 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 321 4.7999999999999987e-107   NR MBX7133539.1 2682144 g9062 i0 74.9 0.864902506963788 207 52 86.5 0 718 98 98 304 MBX7133539.1 TonB-dependent receptor [Fimbriimonadaceae bacterium] diamond 621 321 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
23283730 23283730 PRJNA1215774_P_NODE_78599_length_245_cov_0.895349_g78279_i0 PRJNA1215774 78599 245 0.895349 2.19360505 Armatimonadetes bacterium Uphvl-Ar2 2004468 Bacteria Bacteria 309 1.19e-79   NTclustered gi|1199101103|gb|CP021424.1| 2004468 g78279 i0 89.388 1 245 26 100 0 1 245 348613 348857 Armatimonadetes bacterium Uphvl-Ar2 genome blastn 245 309 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Uphvl-Ar2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;