RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1215774", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1215774 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10535066 10535066 PRJNA1215774_P_NODE_53809_length_287_cov_1.285047_g53489_i0 PRJNA1215774 53809 287 1.285047 3.68808489 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 154 1.05e-44   NR OMJ67736.1 5963 g53489 i0 70.2 1.97560975609756 94 28 98.3 0 1 282 137 230 OMJ67736.1 hypothetical protein SteCoe_35015 [Stentor coeruleus] diamond 567 154 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
32507425 32507425 PRJNA1215774_P_NODE_75279_length_247_cov_0.885057_g74959_i0 PRJNA1215774 75279 247 0.885057 2.18609079 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 66.6 1.52e-10   NR CDW82236.1 5949 g74959 i0 58 1.82186234817814 50 20 59.5 1 162 16 92 141 CDW82236.1 calpain family cysteine protease containing protein [Stylonychia lemnae] diamond 450 66.6 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;