contig_metadata
5 rows where bioproject = "PRJNA1215774", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19457370 | 19457370 | PRJNA1215774_P_NODE_62336_length_265_cov_1.604167_g62016_i0 | PRJNA1215774 | 62336 | 265 | 1.604167 | 4.25104255 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 187 | 6.3599999999999985e-43 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g62016 | i0 | 80.228 | 7.67924528301887 | 263 | 40 | 96 | 9 | 1 | 254 | 115208 | 114949 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 2035 | 187 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 24557325 | 24557325 | PRJNA1215774_P_NODE_50360_length_297_cov_1.375000_g50040_i0 | PRJNA1215774 | 50360 | 297 | 1.375 | 4.08375 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 171 | 7.299999999999999e-38 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g50040 | i0 | 81.308 | 2.04713804713805 | 214 | 36 | 71 | 4 | 1 | 212 | 38460 | 38671 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 608 | 171 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 27135468 | 27135468 | PRJNA1215774_P_NODE_69982_length_250_cov_0.870056_g69662_i0 | PRJNA1215774 | 69982 | 250 | 0.870056 | 2.17514 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 117 | 3.35e-29 | NR | MEE8549935.1 | 2026742 | g69662 | i0 | 71.6 | 0.972 | 81 | 23 | 97.2 | 0 | 4 | 246 | 290 | 370 | MEE8549935.1 class I SAM-dependent methyltransferase [Gemmatimonadota bacterium] | diamond | 243 | 117 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28114842 | 28114842 | PRJNA1215774_P_NODE_41485_length_327_cov_1.818898_g41165_i0 | PRJNA1215774 | 41485 | 327 | 1.818898 | 5.94779646 | Gemmatirosa sp. | 2510638 | Bacteria | Bacteria | 47.8 | 2.93e-4 | NR | HZF67059.1 | 2510638 | g41165 | i0 | 48.9 | 0.862385321100917 | 47 | 24 | 43.1 | 0 | 152 | 12 | 1 | 47 | HZF67059.1 hypothetical protein [Gemmatirosa sp.] | diamond | 282 | 47.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa sp. | |
| 28620310 | 28620310 | PRJNA1215774_P_NODE_66147_length_256_cov_1.437158_g65827_i0 | PRJNA1215774 | 66147 | 256 | 1.437158 | 3.67912448 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 146 | 2.47e-41 | NR | MCA0377726.1 | 2026742 | g65827 | i0 | 85.5 | 0.97265625 | 83 | 12 | 97.3 | 0 | 2 | 250 | 84 | 166 | MCA0377726.1 arginine N-succinyltransferase [Gemmatimonadota bacterium] | diamond | 249 | 146 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;