RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1215774", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1215774 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26883015 26883015 PRJNA1215774_P_NODE_60261_length_270_cov_1.563452_g59941_i0 PRJNA1215774 60261 270 1.563452 4.2213204 Minisyncoccota bacterium 2053589 Bacteria Bacteria 71.2 2.7e-13   NR MBP9782489.1 2053589 g59941 i0 42 0.977777777777778 88 49 97.8 2 266 3 33 118 MBP9782489.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 264 71.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28525602 28525602 PRJNA1215774_P_NODE_75287_length_247_cov_0.885057_g74967_i0 PRJNA1215774 75287 247 0.885057 2.18609079 Minisyncoccia bacterium 3120121 Bacteria Bacteria 85.5 5.22e-19   NR MFN3693035.1 3120121 g74967 i0 75.5 0.643724696356275 53 13 64.4 0 3 161 94 146 MFN3693035.1 type II secretion system protein [Minisyncoccia bacterium] diamond 159 85.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia       Minisyncoccia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;