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contig_metadata

25 rows where bioproject = "PRJNA1214993", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 25 ✖

tax_phylum 1

  • Myxococcota · 25 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1214993 · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15633209 15633209 PRJNA1214993_P_NODE_213_length_1738_cov_24.783183_g167_i0 PRJNA1214993 213 1738 24.783183 430.73172054 Pendulispora brunnea 2905690 Bacteria Bacteria 2248 0   NTclustered gi|2698055994|gb|CP089982.1| 2905690 g167 i0 90.109 160.72669735328 1749 147 99 21 1 1736 7409503 7407768 Pendulispora brunnea strain MSr12523 chromosome, complete genome blastn 279343 2248 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora brunnea
26755967 26755967 PRJNA1214993_P_NODE_8961_length_364_cov_1.525773_g8775_i0 PRJNA1214993 8961 364 1.525773 5.55381372 Polyangia bacterium 3058050 Bacteria Bacteria 181 1.72e-53   NR HEX2568019.1 3058050 g8775 i0 67.5 2.95054945054945 120 39 98.9 0 362 3 104 223 HEX2568019.1 methyltransferase domain-containing protein [Polyangia bacterium] diamond 1074 181 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
27028236 27028236 PRJNA1214993_P_NODE_13562_length_300_cov_1.030837_g13376_i0 PRJNA1214993 13562 300 1.030837 3.092511 Bacteria 2 Bacteria Bacteria 74.7 1.19e-13   NR APR78274.1 888845 g13376 i0 41.6 2.98 101 54 98 3 295 2 21 119 APR78274.1 Hypothetical protein A7982_03621 [Minicystis rosea] diamond 894 74.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis rosea
27452088 27452088 PRJNA1214993_P_NODE_17043_length_271_cov_1.575758_g16857_i0 PRJNA1214993 17043 271 1.575758 4.27030418 Nannocystis sp. ILAH1 2996789 Bacteria Bacteria 52.8 1.64e-5   NR WP_267741719.1 2996789 g16857 i0 39.3 1.88191881918819 89 43 90.8 3 249 4 1772 1856 WP_267741719.1 LamG-like jellyroll fold domain-containing protein [Nannocystis sp. ILAH1] diamond 510 52.8 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis sp. ILAH1
27502470 27502470 PRJNA1214993_P_NODE_15903_length_280_cov_1.169082_g15717_i0 PRJNA1214993 15903 280 1.169082 3.2734296 Myxococcia 32015 Bacteria Bacteria 144 1.22e-37   NR HEY8377888.1 1962667 g15717 i0 76.3 26.9035714285714 93 22 99.6 0 1 279 34 126 HEY8377888.1 SDR family NAD(P)-dependent oxidoreductase [Nannocystis sp.] diamond 7533 145 0.993103448275862 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis sp.
27609836 27609836 PRJNA1214993_P_NODE_20424_length_251_cov_1.348315_g20238_i0 PRJNA1214993 20424 251 1.348315 3.38427065 Polyangiaceae bacterium 2268199 Bacteria Bacteria 51.2 2.43e-5   NR HEY1698064.1 2268199 g20238 i0 42.5 1.91235059760956 80 37 94.4 5 8 244 6 77 HEY1698064.1 glutathione S-transferase family protein [Polyangiaceae bacterium] diamond 480 51.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27704848 27704848 PRJNA1214993_P_NODE_26484_length_235_cov_2.518519_g26298_i0 PRJNA1214993 26484 235 2.518519 5.91851965 Polyangiaceae bacterium 2268199 Bacteria Bacteria 76.6 3.18e-14   NR HEY6728916.1 2268199 g26298 i0 50 0.893617021276596 70 35 89.4 0 3 212 262 331 HEY6728916.1 phosphoglycerate kinase [Polyangiaceae bacterium] diamond 210 76.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27881123 27881123 PRJNA1214993_P_NODE_12545_length_312_cov_0.970711_g12359_i0 PRJNA1214993 12545 312 0.970711 3.02861832 Bacteria 2 Bacteria Bacteria 87 2.12e-17   NR MCK6510237.1 2818507 g12359 i0 45.6 4.79807692307692 103 55 99 1 3 311 386 487 MCK6510237.1 leucyl aminopeptidase [Myxococcota bacterium] diamond 1497 87.4 0.995423340961098 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28620278 28620278 PRJNA1214993_P_NODE_17767_length_266_cov_1.196891_g17581_i0 PRJNA1214993 17767 266 1.196891 3.18373006 Myxococcales bacterium 2026763 Bacteria Bacteria 54.3 4.22e-6   NR MBL91784.1 2026763 g17581 i0 44.9 0.552631578947368 49 25 55.3 2 26 172 266 312 MBL91784.1 hypothetical protein [Myxococcales bacterium] diamond 147 54.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28841045 28841045 PRJNA1214993_P_NODE_9968_length_347_cov_1.124088_g9782_i0 PRJNA1214993 9968 347 1.124088 3.90058536 Myxococcales bacterium 2026763 Bacteria Bacteria 50.4 2.14e-4   NR MBK9070054.1 2026763 g9782 i0 37.2 0.674351585014409 78 43 64 4 113 334 231 306 MBK9070054.1 PPC domain-containing protein [Myxococcales bacterium] diamond 234 50.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28999376 28999376 PRJNA1214993_P_NODE_3968_length_533_cov_2.010870_g3783_i0 PRJNA1214993 3968 533 2.01087 10.7179371 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 64.7 1.67e-8   NR TNE44083.1 2026735 g3783 i0 57.4 1.05816135084428 47 20 26.5 0 531 391 82 128 TNE44083.1 MAG: discoidin domain-containing protein [Deltaproteobacteria bacterium] diamond 564 64.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29346396 29346396 PRJNA1214993_P_NODE_10969_length_332_cov_1.783784_g10783_i0 PRJNA1214993 10969 332 1.783784 5.92216288 Enhygromyxa sp. 2666105 Bacteria Bacteria 99.8 4.03e-22   NR HVH99620.1 2666105 g10783 i0 44.9 0.966867469879518 107 53 95.8 3 9 326 264 365 HVH99620.1 cellulase family glycosylhydrolase [Enhygromyxa sp.] diamond 321 99.8 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Enhygromyxa Enhygromyxa sp.
29535741 29535741 PRJNA1214993_P_NODE_12610_length_311_cov_1.201681_g12424_i0 PRJNA1214993 12610 311 1.201681 3.73722791 Myxococcales bacterium 2026763 Bacteria Bacteria 96.3 1.09e-20   NR MBL8606644.1 2026763 g12424 i0 50.5 0.916398713826367 95 46 90.7 1 296 15 328 422 MBL8606644.1 hypothetical protein [Myxococcales bacterium] diamond 285 96.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29535787 29535787 PRJNA1214993_P_NODE_8910_length_365_cov_1.496575_g8724_i0 PRJNA1214993 8910 365 1.496575 5.46249875 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 48.9 6.98e-4   NR MBI3555187.1 2026735 g8724 i0 45.8 0.394520547945205 48 24 37.8 1 139 2 54 101 MBI3555187.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 144 48.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29819712 29819712 PRJNA1214993_P_NODE_19731_length_253_cov_0.866667_g19545_i0 PRJNA1214993 19731 253 0.866667 2.19266751 Myxococcaceae bacterium 2484252 Bacteria Bacteria 66.6 1.57e-10   NR MCA2980133.1 2484252 g19545 i0 63.4 0.486166007905138 41 15 48.6 0 253 131 4 44 MCA2980133.1 hypothetical protein [Myxococcaceae bacterium] diamond 123 66.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
30104155 30104155 PRJNA1214993_P_NODE_23272_length_247_cov_0.885057_g23086_i0 PRJNA1214993 23272 247 0.885057 2.18609079 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 110 1.9400000000000003e-27   NR MBO6937473.1 2026735 g23086 i0 67.9 1.96761133603239 81 22 98.4 2 247 5 14 90 MBO6937473.1 exonuclease domain-containing protein [Deltaproteobacteria bacterium] diamond 486 110 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30357552 30357552 PRJNA1214993_P_NODE_8252_length_378_cov_0.816393_g8066_i0 PRJNA1214993 8252 378 0.816393 3.08596554 Polyangiaceae bacterium 2268199 Bacteria Bacteria 45.4 0.016   NR HVY29083.1 2268199 g8066 i0 26.5 0.896825396825397 113 69 80.2 2 18 320 217 327 HVY29083.1 hypothetical protein [Polyangiaceae bacterium] diamond 339 45.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30452040 30452040 PRJNA1214993_P_NODE_21193_length_250_cov_0.881356_g21007_i0 PRJNA1214993 21193 250 0.881356 2.20339 Myxococcales bacterium 2026763 Bacteria Bacteria 93.6 5.49e-20   NR MBT9555180.1 2026763 g21007 i0 57.8 0.996 83 32 99.6 3 2 250 101 180 MBT9555180.1 PKD domain-containing protein [Myxococcales bacterium] diamond 249 93.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30862497 30862497 PRJNA1214993_P_NODE_10474_length_339_cov_0.988722_g10288_i0 PRJNA1214993 10474 339 0.988722 3.35176758 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 84 5.19e-17   NR RMG94844.1 2026735 g10288 i0 44 0.743362831858407 84 46 74.3 1 297 46 111 193 RMG94844.1 MAG: hypothetical protein D6705_15075 [Deltaproteobacteria bacterium] diamond 252 84 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31146476 31146476 PRJNA1214993_P_NODE_13535_length_300_cov_1.356828_g13349_i0 PRJNA1214993 13535 300 1.356828 4.070484 Nannocystaceae bacterium 2545255 Bacteria Bacteria 125 6.129999999999999e-32   NR MEZ4448627.1 2545255 g13349 i0 62.2 0.98 98 37 98 0 3 296 97 194 MEZ4448627.1 acetyl-CoA C-acetyltransferase [Nannocystaceae bacterium] diamond 294 125 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae   Nannocystaceae bacterium
31558248 31558248 PRJNA1214993_P_NODE_21816_length_249_cov_0.886364_g21630_i0 PRJNA1214993 21816 249 0.886364 2.20704636 Sandaracinus amylolyticus 927083 Bacteria Bacteria 68.2 4.26e-11   NR WP_236606936.1 927083 g21630 i0 47.5 3.81927710843373 80 38 91.6 1 230 3 167 246 WP_236606936.1 trypsin-like serine peptidase [Sandaracinus amylolyticus] diamond 951 68.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
32032591 32032591 PRJNA1214993_P_NODE_2778_length_632_cov_2.359571_g2600_i0 PRJNA1214993 2778 632 2.359571 14.91248872 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 91.7 2.94e-18   NR TNE43614.1 2026735 g2600 i0 33.8 1.89398734177215 210 124 97.8 6 632 15 73 271 TNE43614.1 MAG: SAM-dependent methyltransferase [Deltaproteobacteria bacterium] diamond 1197 91.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32127640 32127640 PRJNA1214993_P_NODE_17118_length_270_cov_5.106599_g16932_i0 PRJNA1214993 17118 270 5.106599 13.7878173 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 87.4 3.05e-20   NR MBN2798920.1 2026735 g16932 i0 49.4 0.966666666666667 87 44 96.7 0 265 5 1 87 MBN2798920.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 261 87.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32853719 32853719 PRJNA1214993_P_NODE_9980_length_347_cov_0.817518_g9794_i0 PRJNA1214993 9980 347 0.817518 2.83678746 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 45.1 0.0188   NR MDX2165657.1 2026735 g9794 i0 30.8 0.674351585014409 78 49 65.7 2 19 246 692 766 MDX2165657.1 glycosyltransferase [Deltaproteobacteria bacterium] diamond 234 45.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32903912 32903912 PRJNA1214993_P_NODE_16560_length_275_cov_1.143564_g16374_i0 PRJNA1214993 16560 275 1.143564 3.144801 Pseudomonadati 3379134 Bacteria Bacteria 70.5 1.24e-12   NR NQW62152.1 2026735 g16374 i0 42.7 3.24 75 37 78.5 2 49 264 22 93 NQW62152.1 lipocalin family protein [Deltaproteobacteria bacterium] diamond 891 70.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;