RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1214993" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1214993 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2881277 2881277 PRJNA1214993_P_NODE_25663_length_243_cov_0.905882_g25477_i0 PRJNA1214993 25663 243 0.905882 2.20129326 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 101 2.61e-25   NR PJF19033.1 1246581 g25477 i0 62.5 1.93827160493827 80 30 98.8 0 242 3 3 82 PJF19033.1 RNA recognition motif domain-containing protein [Paramicrosporidium saccamoebae] diamond 471 101 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
26946018 26946018 PRJNA1214993_P_NODE_9482_length_355_cov_1.106383_g9296_i0 PRJNA1214993 9482 355 1.106383 3.92765965 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 135 2.39e-34   NR PJF19207.1 1246581 g9296 i0 61.9 1.90985915492958 113 42 94.6 1 339 4 570 682 PJF19207.1 Glutamate-trna ligase [Paramicrosporidium saccamoebae] diamond 678 135 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
27830730 27830730 PRJNA1214993_P_NODE_24024_length_245_cov_1.284884_g23838_i0 PRJNA1214993 24024 245 1.284884 3.1479658 Rozella allomycis CSF55 988480 Fungi Fungi 53.5 5.5e-6   NR EPZ31736.1 988480 g23838 i0 36.5 0.771428571428571 63 40 77.1 0 199 11 116 178 EPZ31736.1 tRNA delta(2)-isopentenylpyrophosphate transferase domain-containing protein [Rozella allomycis CSF55] diamond 189 53.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30672862 30672862 PRJNA1214993_P_NODE_7393_length_396_cov_4.291022_g7207_i0 PRJNA1214993 7393 396 4.291022 16.99244712 Rozella allomycis CSF55 988480 Fungi Fungi 166 3.59e-50   NR EPZ31907.1 988480 g7207 i0 69.4 11.2424242424242 121 37 91.7 0 363 1 1 121 EPZ31907.1 60S ribosomal protein L26-2 [Rozella allomycis CSF55] diamond 4452 166 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;