RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1214993" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1214993 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30736102 30736102 PRJNA1214993_P_NODE_23434_length_246_cov_1.196532_g23248_i0 PRJNA1214993 23434 246 1.196532 2.94346872 Chlamydiales bacterium 2047757 Bacteria Bacteria 143 9.149999999999999e-42   NR MCP5470421.1 2047757 g23248 i0 83.8 0.975609756097561 80 13 97.6 0 241 2 31 110 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 240 143 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31874261 31874261 PRJNA1214993_P_NODE_18597_length_260_cov_1.235294_g18411_i0 PRJNA1214993 18597 260 1.235294 3.2117644 Chlamydiales bacterium 2047757 Bacteria Bacteria 77 2.39e-14   NR MDF2577313.1 2047757 g18411 i0 55.2 0.773076923076923 67 29 77.3 1 258 58 267 332 MDF2577313.1 hypothetical protein [Chlamydiales bacterium] diamond 201 77 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;