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contig_metadata

18 rows where bioproject = "PRJNA1214993", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 18 ✖

tax_phylum 1

  • Bdellovibrionota · 18 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1214993 · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
330280 330280 PRJNA1214993_P_NODE_20621_length_251_cov_0.876404_g20435_i0 PRJNA1214993 20621 251 0.876404 2.19977404 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 111 1.4700000000000002e-27   NR MBL7664112.1 2081706 g20435 i0 60.2 1.9840637450199201 83 33 99.2 0 249 1 194 276 MBL7664112.1 ribose-phosphate pyrophosphokinase [Bacteriovoracaceae bacterium] diamond 498 111 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
10534264 10534264 PRJNA1214993_P_NODE_7449_length_395_cov_1.860248_g7263_i0 PRJNA1214993 7449 395 1.860248 7.3479796 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 117 1.9099999999999997e-30   NR MCB0370127.1 2053517 g7263 i0 89.4 0.50126582278481 66 7 50.1 0 198 395 72 137 MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] diamond 198 117 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
11808932 11808932 PRJNA1214993_P_NODE_15910_length_280_cov_1.130435_g15724_i0 PRJNA1214993 15910 280 1.130435 3.165218 Pseudobdellovibrio exovorus 453816 Bacteria Bacteria 340 4.919999999999999e-89   NTclustered gi|469929247|gb|CP003537.1| 1184267 g15724 i0 89.362 74.8357142857143 282 15 100 10 1 280 751599 751867 Bdellovibrio exovorus JSS, complete genome blastn 20954 340 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio exovorus
14359325 14359325 PRJNA1214993_P_NODE_19192_length_255_cov_2.313187_g19006_i0 PRJNA1214993 19192 255 2.313187 5.89862685 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 122 2.43e-33   NR MCB0370127.1 2053517 g19006 i0 90.3 0.729411764705882 62 6 72.9 0 70 255 33 94 MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] diamond 186 122 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
23997489 23997489 PRJNA1214993_P_NODE_15719_length_281_cov_1.500000_g15533_i0 PRJNA1214993 15719 281 1.5 4.215 Bacteriovorax 146784 Bacteria Bacteria 520 5.909999999999999e-143   NTclustered gi|34604519|gb|AY294222.1| 242936 g15533 i0 100 94.1957295373665 281 0 100 0 1 281 306 26 Bacteriovorax sp. EPC3 16S ribosomal RNA gene, partial sequence blastn 26469 520 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp. EPC3
27452116 27452116 PRJNA1214993_P_NODE_6623_length_418_cov_2.113043_g6438_i0 PRJNA1214993 6623 418 2.113043 8.83251974 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 187 7.710000000000001e-58   NR MCB0368045.1 2053517 g6438 i0 68.1 2.92822966507177 138 44 99 0 418 5 34 171 MCB0368045.1 EF-hand domain-containing protein [Bdellovibrionales bacterium] diamond 1224 187 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27736388 27736388 PRJNA1214993_P_NODE_26784_length_223_cov_4.986667_g26598_i0 PRJNA1214993 26784 223 4.986667 11.12026741 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 92 1.86e-22   NR MCB0369232.1 2053517 g26598 i0 55.7 0.94170403587444 70 28 90.1 1 20 220 1 70 MCB0369232.1 hypothetical protein [Bdellovibrionales bacterium] diamond 210 92 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27957099 27957099 PRJNA1214993_P_NODE_16845_length_273_cov_1.155000_g16659_i0 PRJNA1214993 16845 273 1.155 3.15315 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 84.7 4.82e-19   NR MCB0369368.1 2053517 g16659 i0 61.3 0.681318681318681 62 24 68.1 0 191 6 2 63 MCB0369368.1 hypothetical protein [Bdellovibrionales bacterium] diamond 186 84.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28588716 28588716 PRJNA1214993_P_NODE_11307_length_327_cov_1.842520_g11121_i0 PRJNA1214993 11307 327 1.84252 6.0250404 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 68.6 8.74e-13   NR MCB0370563.1 2053517 g11121 i0 50.8 0.596330275229358 65 32 59.6 0 318 124 3 67 MCB0370563.1 hypothetical protein [Bdellovibrionales bacterium] diamond 195 68.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28651697 28651697 PRJNA1214993_P_NODE_23327_length_246_cov_2.109827_g23141_i0 PRJNA1214993 23327 246 2.109827 5.19017442 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 61.6 6.53e-10   NR MCB0370850.1 2053517 g23141 i0 41.6 0.939024390243902 77 41 89 1 223 5 7 83 MCB0370850.1 hypothetical protein [Bdellovibrionales bacterium] diamond 231 61.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28702190 28702190 PRJNA1214993_P_NODE_2767_length_633_cov_2.142857_g2589_i0 PRJNA1214993 2767 633 2.142857 13.56428481 Bacteria 2 Bacteria Bacteria 47.4 0.0288   NR MBD65172.1 2026745 g2589 i0 32.8 1.45023696682464 177 84 79.6 7 568 65 953 1103 MBD65172.1 hypothetical protein [Halobacteriovoraceae bacterium] diamond 918 47.8 0.99163179916318 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae   Halobacteriovoraceae bacterium
29030805 29030805 PRJNA1214993_P_NODE_3728_length_550_cov_1.213836_g3545_i0 PRJNA1214993 3728 550 1.213836 6.676098 Oligoflexia bacterium 2599941 Bacteria Bacteria 58.2 3.62e-6   NR MBC7690966.1 2599941 g3545 i0 37.6 0.507272727272727 93 55 50.7 1 4 282 1296 1385 MBC7690966.1 choice-of-anchor D domain-containing protein [Oligoflexia bacterium] diamond 279 58.2 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
29977825 29977825 PRJNA1214993_P_NODE_22931_length_247_cov_0.896552_g22745_i0 PRJNA1214993 22931 247 0.896552 2.21448344 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 136 8.92e-40   NR MCB0369089.1 2053517 g22745 i0 76.5 0.983805668016194 81 19 98.4 0 245 3 18 98 MCB0369089.1 hypothetical protein [Bdellovibrionales bacterium] diamond 243 136 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30135499 30135499 PRJNA1214993_P_NODE_17072_length_271_cov_1.338384_g16886_i0 PRJNA1214993 17072 271 1.338384 3.62702064 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 150 2.61e-45   NR MCB0370427.1 2053517 g16886 i0 77.8 0.996309963099631 90 20 99.6 0 2 271 2 91 MCB0370427.1 co-chaperone GroES [Bdellovibrionales bacterium] diamond 270 150 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30989060 30989060 PRJNA1214993_P_NODE_20874_length_251_cov_0.865169_g20688_i0 PRJNA1214993 20874 251 0.865169 2.17157419 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 68.6 1.47e-12   NR MCB0370244.1 2053517 g20688 i0 41 0.932270916334661 78 46 93.2 0 248 15 28 105 MCB0370244.1 hypothetical protein [Bdellovibrionales bacterium] diamond 234 68.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31494925 31494925 PRJNA1214993_P_NODE_7436_length_395_cov_3.621118_g7250_i0 PRJNA1214993 7436 395 3.621118 14.3034161 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 194 1.6599999999999998e-60   NR MCB0369154.1 2053517 g7250 i0 71.3 0.979746835443038 129 37 98 0 391 5 1 129 MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] diamond 387 194 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32601928 32601928 PRJNA1214993_P_NODE_4840_length_485_cov_1.740291_g4655_i0 PRJNA1214993 4840 485 1.740291 8.44041135 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 167 8.6e-50   NR MCB0369646.1 2053517 g4655 i0 66.7 0.779381443298969 126 42 77.9 0 392 15 46 171 MCB0369646.1 50S ribosomal protein L22 [Bdellovibrionales bacterium] diamond 378 167 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32885120 32885120 PRJNA1214993_P_NODE_11440_length_325_cov_2.492063_g11254_i0 PRJNA1214993 11440 325 2.492063 8.09920475 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 188 1.6199999999999995e-55   NR MCB0368368.1 2053517 g11254 i0 80.6 0.996923076923077 108 21 99.7 0 2 325 36 143 MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] diamond 324 188 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;