RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1214993" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA1214993 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27388922 27388922 PRJNA1214993_P_NODE_24403_length_245_cov_0.895349_g24217_i0 PRJNA1214993 24403 245 0.895349 2.19360505 Feldmannia irregularis virus a 231992 Viruses Viruses 48.5 3.35e-4   NR YP_009665724.1 231992 g24217 i0 39.3 0.746938775510204 61 33 69.8 1 202 32 64 124 YP_009665724.1 FirrV-1-A48 precursor [Feldmannia irregularis virus a] diamond 183 48.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Phaeovirus Phaeovirus irregularis
27452085 27452085 PRJNA1214993_P_NODE_15663_length_282_cov_0.813397_g15477_i0 PRJNA1214993 15663 282 0.813397 2.29377954 Homavirus sp. 2487769 Viruses Viruses 94.4 1.04e-20   NR AYV82419.1 2487769 g15477 i0 45.6 0.957446808510638 90 49 95.7 0 278 9 233 322 AYV82419.1 MAG: elongation factor 1-alpha-like protein [Homavirus sp.] diamond 270 94.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Homavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;