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contig_metadata

32 rows where bioproject = "PRJNA1214993" and tax_clade = "PVC group"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 32 ✖

bioproject 1

  • PRJNA1214993 · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2881177 2881177 PRJNA1214993_P_NODE_13503_length_300_cov_1.775330_g13317_i0 PRJNA1214993 13503 300 1.77533 5.32599 root 1 Root_unresolved Root_unresolved 110 5.46e-28   NR MDG2093923.1 2052180 g13317 i0 64.1 3.85 78 28 78 0 1 234 128 205 MDG2093923.1 adenylyl-sulfate kinase [Phycisphaerales bacterium] diamond 1155 110 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
2881212 2881212 PRJNA1214993_P_NODE_18223_length_262_cov_2.000000_g18037_i0 PRJNA1214993 18223 262 2 5.24 Bacteria 2 Bacteria Bacteria 151 2.98e-41   NR MBX3463307.1 2026780 g18037 i0 81.4 15.4236641221374 86 16 98.5 0 260 3 362 447 MBX3463307.1 adenosylhomocysteinase [Planctomycetota bacterium] diamond 4041 151 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
6708124 6708124 PRJNA1214993_P_NODE_19966_length_252_cov_1.720670_g19780_i0 PRJNA1214993 19966 252 1.72067 4.3360884 Phycisphaerales bacterium 2052180 Bacteria Bacteria 115 5.49e-28   NR HVU63673.1 2052180 g19780 i0 69.1 2.86904761904762 81 25 96.4 0 244 2 155 235 HVU63673.1 NADP-dependent isocitrate dehydrogenase [Phycisphaerales bacterium] diamond 723 115 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
9973509 9973509 PRJNA1214993_P_NODE_25288_length_243_cov_0.917647_g25102_i0 PRJNA1214993 25288 243 0.917647 2.22988221 Planctomycetota bacterium 2026780 Bacteria Bacteria 63.2 1.77e-9   NR MBJ77738.1 2026780 g25102 i0 44.9 6.55555555555556 78 40 96.3 1 243 10 41 115 MBJ77738.1 3-hydroxybutyryl-CoA dehydrogenase [Planctomycetota bacterium] diamond 1593 63.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
9973527 9973527 PRJNA1214993_P_NODE_9328_length_357_cov_2.795775_g9142_i0 PRJNA1214993 9328 357 2.795775 9.98091675 Pirellulaceae bacterium 2699754 Bacteria Bacteria 129 1.03e-34   NR MFK7736369.1 2699754 g9142 i0 58.9 2.77310924369748 107 40 87.4 2 314 3 21 126 MFK7736369.1 peptidylprolyl isomerase [Pirellulaceae bacterium] diamond 990 129 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
10534092 10534092 PRJNA1214993_P_NODE_10389_length_340_cov_1.677903_g10203_i0 PRJNA1214993 10389 340 1.677903 5.7048702 Singulisphaera sp. Ch08 3120278 Bacteria Bacteria 534 2.62e-147   NTclustered gi|2732846650|gb|CP155447.1| 3120278 g10203 i0 95.015 175.879411764706 341 15 100 2 1 340 3413086 3412747 Singulisphaera sp. Ch08 chromosome, complete genome blastn 59799 534 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Singulisphaera Singulisphaera sp. Ch08
11808940 11808940 PRJNA1214993_P_NODE_17230_length_270_cov_1.187817_g17044_i0 PRJNA1214993 17230 270 1.187817 3.2071059 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 143 2.1199999999999996e-37   NR MBL9115668.1 2026800 g17044 i0 74.4 11 90 23 100 0 1 270 337 426 MBL9115668.1 NADP-dependent isocitrate dehydrogenase [Verrucomicrobiaceae bacterium] diamond 2970 143 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
14359326 14359326 PRJNA1214993_P_NODE_19392_length_254_cov_1.701657_g19206_i0 PRJNA1214993 19392 254 1.701657 4.32220878 Bacteria 2 Bacteria Bacteria 115 2.42e-29   NR OGV21019.1 1798570 g19206 i0 71.4 3.63779527559055 77 22 90.9 0 1 231 164 240 OGV21019.1 MAG: oxidoreductase [Lentisphaerae bacterium GWF2_38_69] diamond 924 116 0.991379310344828 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium GWF2_38_69
16907475 16907475 PRJNA1214993_P_NODE_21094_length_250_cov_0.881356_g20908_i0 PRJNA1214993 21094 250 0.881356 2.20339 uncultured Planctomycetaceae bacterium 100233 Bacteria Bacteria 331 2.6e-86   NTclustered gi|2874253757|emb|OY969698.1| 100233 g20908 i0 90.837 125.372 251 18 99 5 3 250 4421030 4421278 MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 blastn 31343 331 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   uncultured Planctomycetaceae bacterium
19456383 19456383 PRJNA1214993_P_NODE_20796_length_251_cov_0.865169_g20610_i0 PRJNA1214993 20796 251 0.865169 2.17157419 Luteolibacter sp. SL250 2995170 Bacteria Bacteria 448 2.48e-121   NTclustered gi|2381117106|gb|CP113054.1| 2995170 g20610 i0 98.805 288.05577689243 251 3 100 0 1 251 1032 782 Luteolibacter sp. SL250 chromosome blastn 72302 448 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. SL250
20731715 20731715 PRJNA1214993_P_NODE_13837_length_297_cov_0.995536_g13651_i0 PRJNA1214993 13837 297 0.995536 2.95674192 uncultured Planctomycetaceae bacterium 100233 Bacteria Bacteria 472 1.7899999999999998e-128   NTclustered gi|2874253948|emb|OY970273.1| 100233 g13651 i0 95.578 128.771043771044 294 13 99 0 4 297 2621115 2620822 MAG: uncultured Planctomycetaceae bacterium isolate MFD09495.bin.c.1 genome assembly, chromosome: 1 blastn 38245 472 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   uncultured Planctomycetaceae bacterium
22007030 22007030 PRJNA1214993_P_NODE_12378_length_313_cov_1.950000_g12192_i0 PRJNA1214993 12378 313 1.95 6.1035 Planctomycetota bacterium 2026780 Bacteria Bacteria 179 4.7199999999999984e-55   NR HGY92355.1 2026780 g12192 i0 77.9 1.99361022364217 104 23 99.7 0 312 1 84 187 HGY92355.1 superoxide dismutase [Planctomycetota bacterium] diamond 624 179 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
23997527 23997527 PRJNA1214993_P_NODE_9259_length_359_cov_1.090909_g9073_i0 PRJNA1214993 9259 359 1.090909 3.91636331 Botrimarina 2795782 Bacteria Bacteria 549 9.889999999999996e-152   NTclustered gi|1712768844|gb|CP036350.1| 2527962 g9073 i0 94.398 115.924791086351 357 20 99 0 3 359 4245554 4245198 Planctomycetes bacterium K2D chromosome, complete genome blastn 41617 549 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium K2D
26692766 26692766 PRJNA1214993_P_NODE_25301_length_243_cov_0.917647_g25115_i0 PRJNA1214993 25301 243 0.917647 2.22988221 Phycisphaerales bacterium JB063 3342861 Bacteria Bacteria 68.9 3.71e-12   NR MFI4859409.1 3342861 g25115 i0 53.6 3.46913580246914 69 29 84 2 219 16 37 103 MFI4859409.1 superoxide dismutase family protein [Phycisphaerales bacterium JB063] diamond 843 68.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium JB063
26933317 26933317 PRJNA1214993_P_NODE_14522_length_290_cov_1.437788_g14336_i0 PRJNA1214993 14522 290 1.437788 4.1695852 Bacteria 2 Bacteria Bacteria 81.6 1.42e-15   NR MES2788344.1 2026780 g14336 i0 55.4 6.70344827586207 92 36 95.2 2 1 276 1110 1196 MES2788344.1 ELWxxDGT repeat protein [Planctomycetota bacterium] diamond 1944 81.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26945998 26945998 PRJNA1214993_P_NODE_21382_length_250_cov_0.870056_g21196_i0 PRJNA1214993 21382 250 0.870056 2.17514 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 122 1.15e-31   NR RYD65414.1 2026800 g21196 i0 78.3 0.996 83 16 99.6 1 2 250 103 183 RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] diamond 249 122 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
27407779 27407779 PRJNA1214993_P_NODE_11343_length_327_cov_1.228346_g11157_i0 PRJNA1214993 11343 327 1.228346 4.01669142 Rariglobus 2706524 Bacteria Bacteria 46.6 0.00448   NR MFA6286022.1 2006848 g11157 i0 32.3 2.55045871559633 93 63 85.3 0 28 306 704 796 MFA6286022.1 fibronectin type III domain-containing protein [Opitutaceae bacterium] diamond 834 47 0.991489361702128 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
27799387 27799387 PRJNA1214993_P_NODE_17104_length_271_cov_1.176768_g16918_i0 PRJNA1214993 17104 271 1.176768 3.18904128 Planctomycetota bacterium 2026780 Bacteria Bacteria 46.2 0.00306   NR MBN8643811.1 2026780 g16918 i0 39.3 0.675276752767528 61 35 67.5 1 73 255 283 341 MBN8643811.1 radical SAM family heme chaperone HemW [Planctomycetota bacterium] diamond 183 46.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27862242 27862242 PRJNA1214993_P_NODE_21185_length_250_cov_0.881356_g20999_i0 PRJNA1214993 21185 250 0.881356 2.20339 Planctomycetota bacterium 2026780 Bacteria Bacteria 43.1 0.0281   NR HUT34610.1 2026780 g20999 i0 45.8 0.576 48 26 57.6 0 146 3 279 326 HUT34610.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Planctomycetota bacterium] diamond 144 43.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28399111 28399111 PRJNA1214993_P_NODE_23346_length_246_cov_1.803468_g23160_i0 PRJNA1214993 23346 246 1.803468 4.43653128 Planctomycetota bacterium 2026780 Bacteria Bacteria 42.7 0.0393   NR MCB9832205.1 2026780 g23160 i0 36.6 1 82 49 100 1 1 246 449 527 MCB9832205.1 zf-HC2 domain-containing protein [Planctomycetota bacterium] diamond 246 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28683455 28683455 PRJNA1214993_P_NODE_25187_length_243_cov_1.735294_g25001_i0 PRJNA1214993 25187 243 1.735294 4.21676442 Planctomycetota bacterium 2026780 Bacteria Bacteria 61.6 8.32e-9   NR HYF51941.1 2026780 g25001 i0 57.4 8.71604938271605 68 24 84 2 3 206 1191 1253 HYF51941.1 cadherin domain-containing protein [Planctomycetota bacterium] diamond 2118 61.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29283005 29283005 PRJNA1214993_P_NODE_19649_length_253_cov_0.866667_g19463_i0 PRJNA1214993 19649 253 0.866667 2.19266751 Phycisphaerales bacterium 2052180 Bacteria Bacteria 132 2.05e-36   NR MBY0307717.1 2052180 g19463 i0 74.4 0.924901185770751 78 20 92.5 0 249 16 150 227 MBY0307717.1 S10 family peptidase [Phycisphaerales bacterium] diamond 234 132 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
29567207 29567207 PRJNA1214993_P_NODE_16530_length_275_cov_1.376238_g16344_i0 PRJNA1214993 16530 275 1.376238 3.7846545 Planctomycetota bacterium 2026780 Bacteria Bacteria 53.5 6.95e-6   NR HEX3135187.1 2026780 g16344 i0 42.6 0.741818181818182 68 33 74.2 2 208 5 133 194 HEX3135187.1 hypothetical protein [Planctomycetota bacterium] diamond 204 53.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29693295 29693295 PRJNA1214993_P_NODE_24870_length_244_cov_0.912281_g24684_i0 PRJNA1214993 24870 244 0.912281 2.22596564 Planctomycetota bacterium 2026780 Bacteria Bacteria 42.7 0.0378   NR HYG74935.1 2026780 g24684 i0 40.6 0.786885245901639 64 32 78.7 2 224 33 892 949 HYG74935.1 DUF5060 domain-containing protein [Planctomycetota bacterium] diamond 192 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30009622 30009622 PRJNA1214993_P_NODE_15411_length_283_cov_2.338095_g15225_i0 PRJNA1214993 15411 283 2.338095 6.61680885 Rhodopirellula sp. 2024855 Bacteria Bacteria 43.1 0.0126   NR MDA7873697.1 2024855 g15225 i0 42.1 0.604240282685512 57 20 46.6 3 38 169 45 101 MDA7873697.1 hypothetical protein [Rhodopirellula sp.] diamond 171 43.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Rhodopirellula Rhodopirellula sp.
30736102 30736102 PRJNA1214993_P_NODE_23434_length_246_cov_1.196532_g23248_i0 PRJNA1214993 23434 246 1.196532 2.94346872 Chlamydiales bacterium 2047757 Bacteria Bacteria 143 9.149999999999999e-42   NR MCP5470421.1 2047757 g23248 i0 83.8 0.975609756097561 80 13 97.6 0 241 2 31 110 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 240 143 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31178224 31178224 PRJNA1214993_P_NODE_17295_length_269_cov_1.617347_g17109_i0 PRJNA1214993 17295 269 1.617347 4.35066343 Planctomycetota bacterium 2026780 Bacteria Bacteria 165 1.86e-47   NR MDZ4818359.1 2026780 g17109 i0 83.1 10.9182156133829 89 15 99.3 0 2 268 225 313 MDZ4818359.1 NAD-dependent formate dehydrogenase [Planctomycetota bacterium] diamond 2937 165 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31652710 31652710 PRJNA1214993_P_NODE_14937_length_287_cov_1.378505_g14751_i0 PRJNA1214993 14937 287 1.378505 3.95630935 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 43.1 0.0365   NR HEX3818319.1 2201154 g14751 i0 39.1 1.44250871080139 69 38 69 3 65 262 155 222 HEX3818319.1 CAP domain-containing protein [Chthoniobacterales bacterium] diamond 414 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
31874261 31874261 PRJNA1214993_P_NODE_18597_length_260_cov_1.235294_g18411_i0 PRJNA1214993 18597 260 1.235294 3.2117644 Chlamydiales bacterium 2047757 Bacteria Bacteria 77 2.39e-14   NR MDF2577313.1 2047757 g18411 i0 55.2 0.773076923076923 67 29 77.3 1 258 58 267 332 MDF2577313.1 hypothetical protein [Chlamydiales bacterium] diamond 201 77 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31905925 31905925 PRJNA1214993_P_NODE_14417_length_291_cov_1.412844_g14231_i0 PRJNA1214993 14417 291 1.412844 4.11137604 Gemmataceae bacterium 2052164 Bacteria Bacteria 52.4 2.52e-5   NR MDB5312908.1 2052164 g14231 i0 42.1 1.5360824742268 76 35 78.4 2 286 59 271 337 MDB5312908.1 hypothetical protein [Gemmataceae bacterium] diamond 447 52.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
32475695 32475695 PRJNA1214993_P_NODE_20539_length_251_cov_0.876404_g20353_i0 PRJNA1214993 20539 251 0.876404 2.19977404 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 42.7 0.0383   NR HUJ72026.1 2499141 g20353 i0 41 0.729083665338645 61 23 57.4 3 13 156 141 201 HUJ72026.1 4-alpha-glucanotransferase [Verrucomicrobiia bacterium] diamond 183 42.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32809517 32809517 PRJNA1214993_P_NODE_19120_length_256_cov_1.344262_g18934_i0 PRJNA1214993 19120 256 1.344262 3.44131072 Pseudomonadati 3379134 Bacteria Bacteria 148 7.55e-40   NR MEI6715620.1 2026799 g18934 i0 84.5 9.9375 84 13 98.4 0 2 253 122 205 MEI6715620.1 fumarate hydratase [Verrucomicrobiota bacterium] diamond 2544 148 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;