RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1214993", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1214993 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6148210 6148210 PRJNA1214993_P_NODE_14025_length_295_cov_0.828829_g13839_i0 PRJNA1214993 14025 295 0.828829 2.44504555 Ignavibacteriales 795748 Bacteria Bacteria 305 1.9e-78   NTclustered gi|470490116|ref|NR_076968.1| 591197 g13839 i0 93.269 277.4 208 13 70 1 86 292 1252 1045 Ignavibacterium album strain Mat9-16 23S ribosomal RNA gene, complete sequence blastn 81833 305 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium album
28418147 28418147 PRJNA1214993_P_NODE_20566_length_251_cov_0.876404_g20380_i0 PRJNA1214993 20566 251 0.876404 2.19977404 root 1 Root_unresolved Root_unresolved 133 8.989999999999998e-35   NR OLD68592.1 1805219 g20380 i0 84.5 211.756972111554 84 12 99.2 1 3 251 174 257 OLD68592.1 MAG: hypothetical protein AUI33_09560 [Ignavibacteria bacterium 13_1_40CM_2_61_4] diamond 53151 134 0.992537313432836 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium 13_1_40CM_2_61_4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;