RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1204310", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1204310 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27578113 27578113 PRJNA1204310_P_NODE_46804_length_268_cov_2.400000_g46507_i0 PRJNA1204310 46804 268 2.4 6.432 Candidatus Harpocratesius repetitus 3049170 Archaea Archaea 133 6.019999999999998e-35   NR MCF2139674.1 3049170 g46507 i0 74.2 0.996268656716418 89 23 99.6 0 267 1 1 89 MCF2139674.1 thiolase family protein [Candidatus Harpocratesius repetitus] diamond 267 133 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Candidatus Harpocratesius Candidatus Harpocratesius repetitus
29062252 29062252 PRJNA1204310_P_NODE_4228_length_815_cov_3.756065_g3977_i0 PRJNA1204310 4228 815 3.756065 30.61192975 Promethearchaeota archaeon 2053489 Archaea Archaea 71.2 2.75e-11   NR MBD3254165.1 2053489 g3977 i0 31.9 1.17055214723926 160 95 58.9 4 648 169 3 148 MBD3254165.1 hypothetical protein [Promethearchaeota archaeon] diamond 954 71.2 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;