RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1204310" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1204310 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5432051 5432051 PRJNA1204310_P_NODE_21225_length_394_cov_1.875389_g20928_i0 PRJNA1204310 21225 394 1.875389 7.38903266 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 169 6.3e-47   NR MBI3009019.1 2035772 g20928 i0 72.5 0.776649746192893 102 28 77.7 0 311 6 444 545 MBI3009019.1 formate--tetrahydrofolate ligase [Candidatus Omnitrophota bacterium] diamond 306 169 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28209435 28209435 PRJNA1204310_P_NODE_46686_length_269_cov_1.234694_g46389_i0 PRJNA1204310 46686 269 1.234694 3.32132686 Candidatus Omnitrophus magneticus 1609969 Bacteria Bacteria 42.7 0.0489   NR KJJ86008.1 1609969 g46389 i0 34 0.591078066914498 53 35 59.1 0 90 248 155 207 KJJ86008.1 hypothetical protein OMAG_000125 [Candidatus Omnitrophus magneticus] diamond 159 42.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Omnitrophus Candidatus Omnitrophus magneticus
28809161 28809161 PRJNA1204310_P_NODE_15088_length_457_cov_1.901042_g14791_i0 PRJNA1204310 15088 457 1.901042 8.68776194 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 57.4 3.14e-6   NR MBD3295969.1 2035772 g14791 i0 31.3 0.840262582056893 128 76 82.1 5 439 65 4250 4368 MBD3295969.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 384 57.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31463294 31463294 PRJNA1204310_P_NODE_60236_length_244_cov_0.912281_g59939_i0 PRJNA1204310 60236 244 0.912281 2.22596564 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 52.8 1.01e-5   NR MBU2496194.1 2035772 g59939 i0 60.5 1.36475409836066 38 15 46.7 0 242 129 11 48 MBU2496194.1 tetratricopeptide repeat protein [Candidatus Omnitrophota bacterium] diamond 333 52.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;