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contig_metadata

33 rows where bioproject = "PRJNA1204310" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 33 ✖

bioproject 1

  • PRJNA1204310 · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2879795 2879795 PRJNA1204310_P_NODE_23103_length_380_cov_1.524430_g22806_i0 PRJNA1204310 23103 380 1.52443 5.792834 Prunevirus actinidiae 3241185 Viruses Viruses 697 0   NTclustered gi|1571847414|ref|NC_040800.1| 2560282 g22806 i0 99.737 3 380 1 100 0 1 380 2671 2292 Actinidia seed-borne latent virus isolate 01227, complete genome blastn 1140 697 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae
2880029 2880029 PRJNA1204310_P_NODE_33123_length_324_cov_1.864542_g32826_i0 PRJNA1204310 33123 324 1.864542 6.04111608 Iflavirus sp. 1916690 Viruses Viruses 571 1.8899999999999993e-158   NTclustered gi|2895513727|tpg|BK068484.1| 1916690 g32826 i0 98.457 35.4351851851852 324 5 100 0 1 324 9283 8960 TPA_asm: Iflavirus sp. isolate WUR13 polyprotein gene, complete cds blastn 11481 571 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
2880200 2880200 PRJNA1204310_P_NODE_40063_length_293_cov_0.850000_g39766_i0 PRJNA1204310 40063 293 0.85 2.4905 brine shrimp arlivirus 7 2900382 Viruses Viruses 520 6.2e-143   NTclustered gi|2209095168|gb|OL472412.1| 2900382 g39766 i0 98.635 1 293 4 100 0 1 293 2792 3084 MAG: Brine shrimp arlivirus 7 isolate XZ/98-19 hypothetical protein, RNA-dependent RNA polymerase, and hypothetical protein genes, complete cds blastn 293 520 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 7
2880373 2880373 PRJNA1204310_P_NODE_4783_length_772_cov_1.988555_g4526_i0 PRJNA1204310 4783 772 1.988555 15.3516446 Prunevirus actinidiae 3241185 Viruses Viruses 1404 0   NTclustered gi|1571847414|ref|NC_040800.1| 2560282 g4526 i0 99.482 16.4779792746114 772 4 100 0 1 772 7749 6978 Actinidia seed-borne latent virus isolate 01227, complete genome blastn 12721 1404 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae
4155903 4155903 PRJNA1204310_P_NODE_23544_length_377_cov_1.279605_g23247_i0 PRJNA1204310 23544 377 1.279605 4.82411085 Prunevirus actinidiae 3241185 Viruses Viruses 691 0   NTclustered gi|1571847414|ref|NC_040800.1| 2560282 g23247 i0 99.735 3 377 1 100 0 1 377 2128 1752 Actinidia seed-borne latent virus isolate 01227, complete genome blastn 1131 691 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae
6707212 6707212 PRJNA1204310_P_NODE_45166_length_275_cov_1.158416_g44869_i0 PRJNA1204310 45166 275 1.158416 3.185644 Prunevirus actinidiae 3241185 Viruses Viruses 508 1.2499999999999999e-139   NTclustered gi|1571847414|ref|NC_040800.1| 2560282 g44869 i0 100 4.93090909090909 275 0 100 0 1 275 426 700 Actinidia seed-borne latent virus isolate 01227, complete genome blastn 1356 508 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae
7982934 7982934 PRJNA1204310_P_NODE_48087_length_263_cov_1.642105_g47790_i0 PRJNA1204310 48087 263 1.642105 4.31873615 Iflavirus sp. 1916690 Viruses Viruses 442 1.2199999999999994e-119   NTclustered gi|2895513727|tpg|BK068484.1| 1916690 g47790 i0 96.958 7.97338403041825 263 8 100 0 1 263 5488 5750 TPA_asm: Iflavirus sp. isolate WUR13 polyprotein gene, complete cds blastn 2097 442 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
10533338 10533338 PRJNA1204310_P_NODE_49029_length_259_cov_1.876344_g48732_i0 PRJNA1204310 49029 259 1.876344 4.85973096 Prunevirus actinidiae 3241185 Viruses Viruses 479 9.13e-131   NTclustered gi|1534861450|dbj|LC438404.1| 2560282 g48732 i0 100 3 259 0 100 0 1 259 6818 6560 Actinidia seed borne latent virus JN-BS4 RNA, complete genome blastn 777 479 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae
10533351 10533351 PRJNA1204310_P_NODE_49769_length_256_cov_1.704918_g49472_i0 PRJNA1204310 49769 256 1.704918 4.36459008 Iflavirus sp. 1916690 Viruses Viruses 435 1.98e-117   NTclustered gi|2895513723|tpg|BK068482.1| 1916690 g49472 i0 97.266 6.99609375 256 7 100 0 1 256 1547 1292 TPA_asm: Iflavirus sp. isolate WUR11 polyprotein gene, complete cds blastn 1791 435 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
13082447 13082447 PRJNA1204310_P_NODE_21031_length_396_cov_0.866873_g20734_i0 PRJNA1204310 21031 396 0.866873 3.43281708 Zebrafish picornavirus 1 2304617 Viruses Viruses 643 4.919999999999999e-180   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g20734 i0 95.96 3 396 16 100 0 1 396 7046 7441 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1188 643 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
14357647 14357647 PRJNA1204310_P_NODE_13412_length_483_cov_1.056098_g13115_i0 PRJNA1204310 13412 483 1.056098 5.10095334 Zebrafish picornavirus 1 2304617 Viruses Viruses 793 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g13115 i0 96.273 3 483 18 100 0 1 483 4430 3948 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1449 793 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
14358304 14358304 PRJNA1204310_P_NODE_39732_length_294_cov_1.085973_g39435_i0 PRJNA1204310 39732 294 1.085973 3.19276062 Iflavirus sp. 1916690 Viruses Viruses 516 8.05e-142   NTclustered gi|2895513721|tpg|BK068481.1| 1916690 g39435 i0 98.299 9.3265306122449 294 5 100 0 1 294 3172 2879 TPA_asm: Iflavirus sp. isolate WUR10 polyprotein gene, complete cds blastn 2742 516 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
15632292 15632292 PRJNA1204310_P_NODE_47453_length_266_cov_1.212435_g47156_i0 PRJNA1204310 47453 266 1.212435 3.2250771 Zebrafish picornavirus 1 2304617 Viruses Viruses 481 2.62e-131   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g47156 i0 99.248 3.00375939849624 266 2 100 0 1 266 641 376 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 799 481 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
15632706 15632706 PRJNA1204310_P_NODE_8273_length_604_cov_1.011299_g7987_i0 PRJNA1204310 8273 604 1.011299 6.10824596 Prunevirus actinidiae 3241185 Viruses Viruses 1072 0   NTclustered gi|1534861450|dbj|LC438404.1| 2560282 g7987 i0 98.675 3 604 8 100 0 1 604 3696 4299 Actinidia seed borne latent virus JN-BS4 RNA, complete genome blastn 1812 1072 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae
16347455 16347455 PRJNA1204310_P_NODE_21553_length_391_cov_2.207547_g21256_i0 PRJNA1204310 21553 391 2.207547 8.63150877 Partitiviridae sp. 1955170 Viruses Viruses 157 2.37e-44   NR QDH91349.1 1955170 g21256 i0 63.6 0.989769820971867 129 44 96.7 1 391 14 155 283 QDH91349.1 MAG: hypothetical protein H3Bulk427771_000001, partial [Partitiviridae sp.] diamond 387 157 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Partitiviridae sp.
16905946 16905946 PRJNA1204310_P_NODE_19694_length_407_cov_1.398204_g19397_i0 PRJNA1204310 19694 407 1.398204 5.69069028 Prunevirus actinidiae 3241185 Viruses Viruses 752 0   NTclustered gi|1571847414|ref|NC_040800.1| 2560282 g19397 i0 100 3 407 0 100 0 1 407 5166 4760 Actinidia seed-borne latent virus isolate 01227, complete genome blastn 1221 752 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus actinidiae
18180976 18180976 PRJNA1204310_P_NODE_44455_length_277_cov_1.549020_g44158_i0 PRJNA1204310 44455 277 1.54902 4.2907854 Iflavirus sp. 1916690 Viruses Viruses 466 7.68e-127   NTclustered gi|2895513725|tpg|BK068483.1| 1916690 g44158 i0 97.101 8.94945848375451 276 8 99 0 1 276 8143 7868 TPA_asm: Iflavirus sp. isolate WUR12 polyprotein gene, complete cds blastn 2479 466 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
19455875 19455875 PRJNA1204310_P_NODE_6696_length_665_cov_1.471284_g6416_i0 PRJNA1204310 6696 665 1.471284 9.7840386 Iflavirus sp. 1916690 Viruses Viruses 1157 0   NTclustered gi|2895513727|tpg|BK068484.1| 1916690 g6416 i0 98.045 7.97894736842105 665 13 100 0 1 665 5739 6403 TPA_asm: Iflavirus sp. isolate WUR13 polyprotein gene, complete cds blastn 5306 1157 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
23281496 23281496 PRJNA1204310_P_NODE_43039_length_283_cov_0.952381_g42742_i0 PRJNA1204310 43039 283 0.952381 2.69523823 Zebrafish picornavirus 1 2304617 Viruses Viruses 451 2.1999999999999995e-122   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g42742 i0 95.406 3 283 13 100 0 1 283 5061 5343 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 849 451 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24554786 24554786 PRJNA1204310_P_NODE_14120_length_472_cov_0.892231_g13823_i0 PRJNA1204310 14120 472 0.892231 4.21133032 Zebrafish picornavirus 1 2304617 Viruses Viruses 806 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g13823 i0 97.458 3 472 12 100 0 1 472 6524 6053 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1416 806 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
26882940 26882940 PRJNA1204310_P_NODE_721_length_1564_cov_2.091214_g635_i0 PRJNA1204310 721 1564 2.091214 32.70658696 Cryphonectria naterciae splipalmivirus 1 2841740 Viruses Viruses 196 2.45e-51   NR BCX55509.1 2841740 g635 i0 32.7 0.966751918158568 504 284 92.5 17 115 1560 103 573 BCX55509.1 putative RNA-dependent RNA polymerase [Cryphonectria naterciae splipalmivirus 1] diamond 1512 196 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Splipalmiviridae Divipalmivirus Divipalmivirus cryphonectriae
28039108 28039108 PRJNA1204310_P_NODE_2365_length_1033_cov_2.029167_g2167_i0 PRJNA1204310 2365 1033 2.029167 20.96129511 Narnavirus 186767 Viruses Viruses 138 1.91e-32   NR WZE65507.1 3139161 g2167 i0 30.3 2.03291384317522 350 183 99.6 8 1 1029 262 557 WZE65507.1 RNA-dependent RNA polymerase [Ophiocordyceps sinensis narnavirus 4] diamond 2100 138 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Ophiocordyceps sinensis narnavirus 4
28714849 28714849 PRJNA1204310_P_NODE_28887_length_345_cov_1.720588_g28590_i0 PRJNA1204310 28887 345 1.720588 5.9360286 Downy mildew lesion associated splipalmivirus 3 2719514 Viruses Viruses 46.2 0.00555   NR WNA22210.1 2719514 g28590 i0 44.4 0.469565217391304 54 30 47 0 184 345 54 107 WNA22210.1 MAG: hypothetical protein [Downy mildew lesion associated splipalmivirus 3] diamond 162 46.2 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Splipalmiviridae Jakapalmivirus Jakapalmivirus ibericum
28967553 28967553 PRJNA1204310_P_NODE_5748_length_713_cov_13.000000_g5479_i0 PRJNA1204310 5748 713 13 92.69 Durnavirales sp. 2809355 Viruses Viruses 112 8.899999999999999e-25   NR WRQ64726.1 2809355 g5479 i0 33 0.85413744740533 203 132 84.2 4 107 706 11 212 WRQ64726.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 609 112 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.
29157024 29157024 PRJNA1204310_P_NODE_3869_length_846_cov_1.670116_g3627_i0 PRJNA1204310 3869 846 1.670116 14.12918136 Leptosphaeria biglobosa narnavirus 7 2985682 Viruses Viruses 112 1.0799999999999999e-23   NR UYL94525.1 2985682 g3627 i0 32.7 1.6595744680851101 217 136 74.1 5 160 786 38 252 UYL94525.1 MAG: RNA-dependent RNA polymerase [Leptosphaeria biglobosa narnavirus 7] diamond 1404 112 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Leptosphaeria biglobosa narnavirus 7
29724895 29724895 PRJNA1204310_P_NODE_830_length_1501_cov_16.655462_g731_i0 PRJNA1204310 830 1501 16.655462 249.99848462 Durnavirales sp. 2809355 Viruses Viruses 295 1.32e-90   NR WRQ64726.1 2809355 g731 i0 35.7 0.939373750832778 470 296 92.9 6 107 1501 11 479 WRQ64726.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 1410 295 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.
30041027 30041027 PRJNA1204310_P_NODE_831_length_1501_cov_9.115546_g731_i1 PRJNA1204310 831 1501 9.115546 136.82434546 Durnavirales sp. 2809355 Viruses Viruses 294 3.69e-90   NR WRQ64726.1 2809355 g731 i1 35.7 0.939373750832778 470 296 92.9 6 107 1501 11 479 WRQ64726.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 1410 294 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.
30262446 30262446 PRJNA1204310_P_NODE_36112_length_310_cov_1.645570_g35815_i0 PRJNA1204310 36112 310 1.64557 5.101267 Frijoles virus VP-161A 426788 Viruses Viruses 69.7 1.63e-12   NR YP_009665189.1 426788 g35815 i0 44.8 0.841935483870968 87 46 84.2 1 295 35 27 111 YP_009665189.1 N protein, partial [Frijoles virus VP-161A] diamond 261 69.7 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Phenuiviridae Phlebovirus Phlebovirus limboense
30420488 30420488 PRJNA1204310_P_NODE_2093_length_1084_cov_7.941642_g1905_i0 PRJNA1204310 2093 1084 7.941642 86.08739928 Narnavirus sp. 2587225 Viruses Viruses 65.1 1.26e-8   NR CAK8705411.1 2587225 g1905 i0 34.4 1.26752767527675 128 73 34.9 3 992 615 4 122 CAK8705411.1 uncharacterized [Narnavirus sp.] diamond 1374 65.1 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
31052337 31052337 PRJNA1204310_P_NODE_4595_length_787_cov_1.676471_g4338_i0 PRJNA1204310 4595 787 1.676471 13.19382677 Aspergillus fumigatus narnavirus 2 2250450 Viruses Viruses 54.3 2.6e-4   NR BCH36628.1 2250450 g4338 i0 26.4 0.880559085133418 231 147 82.7 8 113 763 262 483 BCH36628.1 hypothetical protein [Aspergillus fumigatus narnavirus 2] diamond 693 54.3 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Splipalmiviridae Divipalmivirus Divipalmivirus aspergilli
31811013 31811013 PRJNA1204310_P_NODE_16497_length_440_cov_1.220708_g16200_i0 PRJNA1204310 16497 440 1.220708 5.3711152 Narnavirus sp. 2587225 Viruses Viruses 170 6.68e-46   NR CAK7594502.1 2587225 g16200 i0 55.1 0.940909090909091 138 61 93.4 1 435 25 97 234 CAK7594502.1 RNA-dependent RNA polymerase, partial [Narnavirus sp.] diamond 414 170 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
32254291 32254291 PRJNA1204310_P_NODE_34618_length_317_cov_1.750000_g34321_i0 PRJNA1204310 34618 317 1.75 5.5475 Narnavirus sp. 2587225 Viruses Viruses 103 5.42e-23   NR CAK7594523.1 2587225 g34321 i0 49.1 1.89274447949527 106 53 99.4 1 315 1 781 886 CAK7594523.1 RNA-dependent RNA polymerase, partial [Narnavirus sp.] diamond 600 103 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
32462774 32462774 PRJNA1204310_P_NODE_1939_length_1117_cov_1.754789_g1756_i0 PRJNA1204310 1939 1117 1.754789 19.60099313 Viruses 10239 Viruses Viruses 72.8 7.79e-10   NR WPR16641.1 3066944 g1756 i0 21.9 1.77529095792301 319 228 84.1 6 72 1010 274 577 WPR16641.1 MAG: RNA-dependent RNA polymerase [Mbeech associated narna-like virus 2] diamond 1983 73.2 0.994535519125683 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Mbeech associated narna-like virus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;