RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where bioproject = "PRJNA1204310" and tax_kingdom = "Methanobacteriati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 23 ✖

bioproject 1

  • PRJNA1204310 · 23 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8697899 8697899 PRJNA1204310_P_NODE_21907_length_389_cov_0.987342_g21610_i0 PRJNA1204310 21907 389 0.987342 3.84076038 Thermoplasmata archaeon 1906666 Archaea Archaea 98.2 1.37e-22   NR UCF08245.1 1906666 g21610 i0 43.2 0.96401028277635 125 70 95.6 1 6 377 45 169 UCF08245.1 MAG: ribonuclease Z, partial [Thermoplasmata archaeon] diamond 375 98.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
26819610 26819610 PRJNA1204310_P_NODE_28401_length_348_cov_1.134545_g28104_i0 PRJNA1204310 28401 348 1.134545 3.9482166 Methanobacteriota archaeon 2026739 Archaea Archaea 159 4.2e-45   NR MBJ62011.1 2026739 g28104 i0 62.6 0.991379310344828 115 42 98.3 1 5 346 215 329 MBJ62011.1 hypothetical protein [Methanobacteriota archaeon] diamond 345 159 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
26945963 26945963 PRJNA1204310_P_NODE_58542_length_246_cov_0.901734_g58245_i0 PRJNA1204310 58542 246 0.901734 2.21826564 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 49.3 1.66e-4   NR MDE0953844.1 2163009 g58245 i0 48 0.609756097560976 50 26 61 0 235 86 60 109 MDE0953844.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 150 49.3 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
27325481 27325481 PRJNA1204310_P_NODE_18163_length_421_cov_1.344828_g17866_i0 PRJNA1204310 18163 421 1.344828 5.66172588 Thermoplasmatota archaeon 2806419 Archaea Archaea 73.6 4.49e-12   NR MEC7483603.1 2806419 g17866 i0 40.4 1.62470308788599 114 55 80.5 4 419 81 66 167 MEC7483603.1 hypothetical protein [Thermoplasmatota archaeon] diamond 684 73.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
27514980 27514980 PRJNA1204310_P_NODE_46323_length_270_cov_1.583756_g46026_i0 PRJNA1204310 46323 270 1.583756 4.2761412 Methanobrevibacter arboriphilus 39441 Archaea Archaea 46.6 0.00223   NR WP_054835095.1 39441 g46026 i0 47.8 2.23333333333333 67 33 72.2 1 265 71 42 108 WP_054835095.1 Ig-like domain-containing protein [Methanobrevibacter arboriphilus] diamond 603 46.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
27786591 27786591 PRJNA1204310_P_NODE_20324_length_401_cov_1.536585_g20027_i0 PRJNA1204310 20324 401 1.536585 6.16170585 root 1 Root_unresolved Root_unresolved 73.2 3.83e-12   NR WP_214021670.1 90427 g20027 i0 54.5 3.99501246882793 66 27 49.4 1 328 131 4 66 WP_214021670.1 molecular chaperone DnaJ [Methanoculleus sp.] diamond 1602 73.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
27799351 27799351 PRJNA1204310_P_NODE_57264_length_247_cov_0.896552_g56967_i0 PRJNA1204310 57264 247 0.896552 2.21448344 Methanosarcinales archaeon 2250255 Archaea Archaea 93.6 4.7e-20   NR RYE85578.1 2250255 g56967 i0 49.4 1.05668016194332 87 39 99.6 1 2 247 432 518 RYE85578.1 MAG: hypothetical protein EOO65_00010 [Methanosarcinales archaeon] diamond 261 93.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28177785 28177785 PRJNA1204310_P_NODE_46866_length_268_cov_1.600000_g46569_i0 PRJNA1204310 46866 268 1.6 4.288 Thermoplasmatota archaeon 2806419 Archaea Archaea 66.6 2.02e-10   NR MEC7483603.1 2806419 g46569 i0 42 9.88432835820896 88 42 97.4 3 5 265 68 147 MEC7483603.1 hypothetical protein [Thermoplasmatota archaeon] diamond 2649 66.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28209419 28209419 PRJNA1204310_P_NODE_18706_length_416_cov_1.160350_g18409_i0 PRJNA1204310 18706 416 1.16035 4.827056 Methanothrix sp. 90426 Archaea Archaea 62 4.51e-8   NR TFH52534.1 90426 g18409 i0 58.8 0.663461538461538 51 18 34.6 1 94 237 590 640 TFH52534.1 MAG: hypothetical protein E4G89_01470 [Methanothrix sp.] diamond 276 62 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28620251 28620251 PRJNA1204310_P_NODE_62167_length_242_cov_0.923077_g61870_i0 PRJNA1204310 62167 242 0.923077 2.23384634 Halorhabdus sp. 1961697 Archaea Archaea 45.1 0.00559   NR MFB6202023.1 1961697 g61870 i0 33.8 0.991735537190083 80 37 79.3 3 195 4 177 256 MFB6202023.1 hypothetical protein [Halorhabdus sp.] diamond 240 45.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halorhabdus Halorhabdus sp.
28746380 28746380 PRJNA1204310_P_NODE_62567_length_242_cov_0.923077_g62270_i0 PRJNA1204310 62567 242 0.923077 2.23384634 Halosimplex pelagicum 869886 Archaea Archaea 42.4 0.0338   NR WP_179918470.1 869886 g62270 i0 41.5 0.65702479338843 53 28 62 2 51 200 110 162 WP_179918470.1 hypothetical protein [Halosimplex pelagicum] diamond 159 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex pelagicum
28840974 28840974 PRJNA1204310_P_NODE_43088_length_282_cov_1.866029_g42791_i0 PRJNA1204310 43088 282 1.866029 5.26220178 Methanobacteriota archaeon 2026739 Archaea Archaea 56.6 7.46e-7   NR MBJ35148.1 2026739 g42791 i0 49.2 0.648936170212766 61 30 63.8 1 102 281 323 383 MBJ35148.1 hypothetical protein [Methanobacteriota archaeon] diamond 183 56.6 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29125543 29125543 PRJNA1204310_P_NODE_55569_length_249_cov_0.886364_g55272_i0 PRJNA1204310 55569 249 0.886364 2.20704636 Methanobacteriota archaeon 2026739 Archaea Archaea 96.3 5.96e-21   NR MAO69667.1 2026739 g55272 i0 56.1 0.987951807228916 82 32 94 1 14 247 1131 1212 MAO69667.1 hypothetical protein [Methanobacteriota archaeon] diamond 246 96.3 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30546534 30546534 PRJNA1204310_P_NODE_16693_length_438_cov_0.975342_g16396_i0 PRJNA1204310 16693 438 0.975342 4.27199796 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 213 2.45e-68   NR HJM77902.1 2670411 g16396 i0 80.5 3.53424657534247 128 25 87.7 0 391 8 5 132 HJM77902.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Candidatus Thalassarchaeaceae archaeon] diamond 1548 213 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
30925925 30925925 PRJNA1204310_P_NODE_50214_length_254_cov_5.464088_g49917_i0 PRJNA1204310 50214 254 5.464088 13.87878352 Methanosarcinales archaeon 2250255 Archaea Archaea 51.2 5.71e-6   NR MCD4843809.1 2250255 g49917 i0 48.4 0.755905511811024 64 33 75.6 0 60 251 6 69 MCD4843809.1 50S ribosomal protein P1 [Methanosarcinales archaeon] diamond 192 51.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
31052317 31052317 PRJNA1204310_P_NODE_26695_length_357_cov_1.834507_g26398_i0 PRJNA1204310 26695 357 1.834507 6.54918999 Methanobacteriota archaeon 2026739 Archaea Archaea 124 2.59e-30   NR GIQ99072.1 2026739 g26398 i0 52.6 0.974789915966387 116 54 96.6 1 2 346 35 150 GIQ99072.1 MAG: hypothetical protein CM15mP6_0890 [Methanobacteriota archaeon] diamond 348 124 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31178183 31178183 PRJNA1204310_P_NODE_48555_length_261_cov_1.659574_g48258_i0 PRJNA1204310 48555 261 1.659574 4.33148814 methanogenic archaeon mixed culture ISO4-G1 1452364 Archaea Archaea 57 2.11e-7   NR AMK14294.1 1452364 g48258 i0 37 0.839080459770115 73 46 83.9 0 232 14 127 199 AMK14294.1 metallophosphoesterase [methanogenic archaeon mixed culture ISO4-G1] diamond 219 57 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     methanogenic archaeon mixed culture ISO4-G1
31209563 31209563 PRJNA1204310_P_NODE_46495_length_270_cov_1.187817_g46198_i0 PRJNA1204310 46495 270 1.187817 3.2071059 Methanobacteriota archaeon 2026739 Archaea Archaea 49.3 2.63e-4   NR MBU38166.1 2026739 g46198 i0 34.5 0.933333333333333 84 52 92.2 3 21 269 1965 2046 MBU38166.1 hypothetical protein [Methanobacteriota archaeon] diamond 252 49.3 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31842461 31842461 PRJNA1204310_P_NODE_41657_length_287_cov_1.457944_g41360_i0 PRJNA1204310 41657 287 1.457944 4.18429928 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 44.7 0.00817   NR HJN55235.1 2163009 g41360 i0 32.9 0.794425087108014 76 50 79.4 1 228 1 33 107 HJN55235.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 228 44.7 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
32254310 32254310 PRJNA1204310_P_NODE_54578_length_250_cov_0.881356_g54281_i0 PRJNA1204310 54578 250 0.881356 2.20339 uncultured marine group II/III euryarchaeote SAT1 1456558 Archaea Archaea 57 4.03e-7   NR AIF23262.1 1456558 g54281 i0 39.1 2.832 87 47 97.2 3 243 1 1936 2022 AIF23262.1 RCC1 domain-containing protein [uncultured marine group II/III euryarchaeote SAT1000_14_B08] diamond 708 57 1 Archaea   Methanobacteriati Methanobacteriota         uncultured marine group II/III euryarchaeote SAT1000_14_B08
32412295 32412295 PRJNA1204310_P_NODE_53019_length_251_cov_0.876404_g52722_i0 PRJNA1204310 53019 251 0.876404 2.19977404 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 42.7 0.0408   NR RCH71065.1 2163009 g52722 i0 35.5 0.908366533864542 76 49 90.8 0 8 235 156 231 RCH71065.1 MAG: hypothetical protein DBX06_07595 [Candidatus Poseidoniales archaeon] diamond 228 42.7 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
32601886 32601886 PRJNA1204310_P_NODE_60300_length_244_cov_0.912281_g60003_i0 PRJNA1204310 60300 244 0.912281 2.22596564 Methanocella paludicola 570267 Archaea Archaea 78.2 9.09e-15   NR WP_012901309.1 570267 g60003 i0 49.4 0.971311475409836 79 35 97.1 2 244 8 181 254 WP_012901309.1 PQQ-dependent sugar dehydrogenase [Methanocella paludicola] diamond 237 78.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella paludicola
32683454 32683454 PRJNA1204310_P_NODE_28980_length_345_cov_1.147059_g28683_i0 PRJNA1204310 28980 345 1.147059 3.95735355 root 1 Root_unresolved Root_unresolved 152 1.45e-40   NR WP_245249312.1 547055 g28683 i0 62.8 12.7826086956522 113 42 98.3 0 2 340 466 578 WP_245249312.1 propionyl-CoA synthetase [Methanolinea mesophila] diamond 4410 153 0.993464052287582 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanolinea Methanolinea mesophila

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;