RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1204310", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1204310 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18181126 18181126 PRJNA1204310_P_NODE_51535_length_252_cov_2.614525_g51238_i0 PRJNA1204310 51535 252 2.614525 6.588603 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 52.8 0.023   NTclustered gi|2874253701|emb|OY969427.1| 157466 g51238 i0 100 0.111111111111111 28 0 11 0 87 114 4677136 4677163 MAG: uncultured Armatimonadetes bacterium isolate MFD09671.bin.1.19 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
32822246 32822246 PRJNA1204310_P_NODE_47660_length_265_cov_1.218750_g47363_i0 PRJNA1204310 47660 265 1.21875 3.2296875 Armatimonadota bacterium 2033014 Bacteria Bacteria 96.7 2.72e-21   NR KAA3638158.1 2033014 g47363 i0 50 3.98490566037736 88 44 99.6 0 2 265 224 311 KAA3638158.1 MAG: M20/M25/M40 family metallo-hydrolase [Armatimonadota bacterium] diamond 1056 96.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;