RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1204310", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA1204310 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27957055 27957055 PRJNA1204310_P_NODE_46345_length_270_cov_1.583756_g46048_i0 PRJNA1204310 46345 270 1.583756 4.2761412 Fidelibacterota bacterium 2026760 Bacteria Bacteria 53.1 9.85e-6   NR MBA25195.1 2026760 g46048 i0 38.8 1.87777777777778 80 44 88.9 2 12 251 178 252 MBA25195.1 hypothetical protein [Fidelibacterota bacterium] diamond 507 53.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30862453 30862453 PRJNA1204310_P_NODE_27394_length_353_cov_1.946429_g27097_i0 PRJNA1204310 27394 353 1.946429 6.87089437 Fidelibacterota bacterium 2026760 Bacteria Bacteria 64.7 2.42e-10   NR MDO9548756.1 2026760 g27097 i0 38.5 0.994334277620397 117 45 98.6 4 4 351 6 96 MDO9548756.1 Hsp20/alpha crystallin family protein [Fidelibacterota bacterium] diamond 351 64.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31558211 31558211 PRJNA1204310_P_NODE_8556_length_594_cov_6.190019_g8269_i0 PRJNA1204310 8556 594 6.190019 36.76871286 Fidelibacterota bacterium 2026760 Bacteria Bacteria 47.8 0.0163   NR MEC8984492.1 2026760 g8269 i0 30.7 1.14646464646465 114 63 56.1 4 97 429 193 293 MEC8984492.1 hypothetical protein [Fidelibacterota bacterium] diamond 681 47.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;