RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1204310", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA1204310 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10533413 10533413 PRJNA1204310_P_NODE_52469_length_252_cov_0.871508_g52172_i0 PRJNA1204310 52469 252 0.871508 2.19620016 Bacteria 2 Bacteria Bacteria 120 4.48e-32   NR MBC8416292.1 2030808 g52172 i0 72.2 11.1309523809524 79 22 94 0 15 251 8 86 MBC8416292.1 DNA-3-methyladenine glycosylase I [Candidatus Cloacimonadota bacterium] diamond 2805 120 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
28083193 28083193 PRJNA1204310_P_NODE_16945_length_434_cov_2.592798_g16648_i0 PRJNA1204310 16945 434 2.592798 11.25274332 Candidatus Cloacimonetes bacterium 4572_55 1971726 Bacteria Bacteria 45.1 0.0441   NR OQY27121.1 1971726 g16648 i0 32.4 0.746543778801843 108 62 69.1 4 110 409 713 817 OQY27121.1 MAG: hypothetical protein B6244_11600 [Candidatus Cloacimonetes bacterium 4572_55] diamond 324 45.1 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonetes bacterium 4572_55
30483412 30483412 PRJNA1204310_P_NODE_49893_length_256_cov_1.278689_g49596_i0 PRJNA1204310 49893 256 1.278689 3.27344384 Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-1 2013733 Bacteria Bacteria 63.2 3.37e-10   NR PKN79692.1 2013733 g49596 i0 54.7 2.90625 53 23 62.1 1 7 165 2 53 PKN79692.1 MAG: 50S ribosomal protein L9 [Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-1] diamond 744 63.2 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;