RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1204310", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woeseibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1204310 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30028438 30028438 PRJNA1204310_P_NODE_46291_length_270_cov_1.868020_g45994_i0 PRJNA1204310 46291 270 1.86802 5.043654 Bacteria 2 Bacteria Bacteria 110 1.86e-26   NR MBP9690617.1 2026804 g45994 i0 58.9 4.01111111111111 90 36 98.9 1 268 2 185 274 MBP9690617.1 pyridoxal phosphate-dependent aminotransferase [Candidatus Woesebacteria bacterium] diamond 1083 110 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
30483391 30483391 PRJNA1204310_P_NODE_29633_length_341_cov_4.574627_g29336_i0 PRJNA1204310 29633 341 4.5746270000000004 15.59947807 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 77.4 5.83e-16   NR MBP9690675.1 2026804 g29336 i0 52.9 0.747800586510264 85 39 73.9 1 39 290 4 88 MBP9690675.1 RNA-binding protein [Candidatus Woesebacteria bacterium] diamond 255 77.4 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
31209564 31209564 PRJNA1204310_P_NODE_46715_length_269_cov_1.193878_g46418_i0 PRJNA1204310 46715 269 1.193878 3.21153182 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 62.8 2.56e-9   NR HRN71286.1 2026804 g46418 i0 40.4 0.992565055762082 89 50 95.9 1 7 264 60 148 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 267 62.8 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;