RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1204310", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Doudnaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Doudnaibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA1204310 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30514896 30514896 PRJNA1204310_P_NODE_10953_length_530_cov_1.816193_g10658_i0 PRJNA1204310 10953 530 1.816193 9.6258229 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 102 5.709999999999999e-23   NR MBL8030819.1 2052150 g10658 i0 36.9 0.950943396226415 168 103 94 2 15 512 77 243 MBL8030819.1 SIMPL domain-containing protein [Candidatus Doudnabacteria bacterium] diamond 504 102 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;