RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1204310", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1204310 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27723662 27723662 PRJNA1204310_P_NODE_25644_length_364_cov_1.010309_g25347_i0 PRJNA1204310 25644 364 1.010309 3.67752476 Bacteria 2 Bacteria Bacteria 110 5.520000000000001e-27   NR MFA6023959.1 2044595 g25347 i0 42.2 1.93681318681319 116 66 95.6 1 3 350 60 174 MFA6023959.1 alanine--tRNA ligase-related protein [Candidatus Altimarinota bacterium] diamond 705 111 0.990990990990991 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30072527 30072527 PRJNA1204310_P_NODE_47132_length_267_cov_1.603093_g46835_i0 PRJNA1204310 47132 267 1.603093 4.28025831 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 43.1 0.0326   NR PZM82194.1 2044595 g46835 i0 28.2 0.797752808988764 71 49 77.5 1 263 57 169 239 PZM82194.1 MAG: hypothetical protein DLH72_04240 [Candidatus Altimarinota bacterium] diamond 213 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;