contig_metadata
10 rows where bioproject = "PRJNA1200128" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9254953 | 9254953 | PRJNA1200128_S_NODE_11748_length_240_cov_1.979695_g11639_i0 | PRJNA1200128 | 11748 | 240 | 1.979695 | 4.751268 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 272 | 1.52e-68 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g11639 | i0 | 88.696 | 456.216666666667 | 230 | 17 | 94 | 8 | 10 | 235 | 15746 | 15522 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 109492 | 272 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 11805689 | 11805689 | PRJNA1200128_S_NODE_4250_length_335_cov_1.763699_g4141_i0 | PRJNA1200128 | 4250 | 335 | 1.763699 | 5.90839165 | Nibricoccus sp. IMCC34717 | 3034021 | Bacteria | Bacteria | 490 | 5.65e-134 | NTclustered | gi|2850969968|gb|CP119759.1| | 3034021 | g4141 | i0 | 93.155 | 77.0179104477612 | 336 | 20 | 100 | 3 | 1 | 335 | 1405303 | 1404970 | Nibricoccus sp. IMCC34717 chromosome, complete genome | blastn | 25801 | 490 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus sp. IMCC34717 | |
| 14356130 | 14356130 | PRJNA1200128_S_NODE_6312_length_292_cov_1.385542_g6203_i0 | PRJNA1200128 | 6312 | 292 | 1.385542 | 4.04578264 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 198 | 3.28e-46 | NTclustered | gi|1243404978|gb|CP023344.1| | 2576891 | g6203 | i0 | 80.228 | 1.17808219178082 | 263 | 52 | 90 | 0 | 2 | 264 | 388424 | 388686 | Nibricoccus aquaticus strain HZ-65 chromosome, complete genome | blastn | 344 | 198 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus | |
| 19453120 | 19453120 | PRJNA1200128_S_NODE_25656_length_188_cov_1.751724_g25547_i0 | PRJNA1200128 | 25656 | 188 | 1.751724 | 3.29324112 | Nibricoccus sp. IMCC34717 | 3034021 | Bacteria | Bacteria | 326 | 8.6e-85 | NTclustered | gi|2850969968|gb|CP119759.1| | 3034021 | g25547 | i0 | 97.872 | 74.4840425531915 | 188 | 4 | 100 | 0 | 1 | 188 | 1405632 | 1405819 | Nibricoccus sp. IMCC34717 chromosome, complete genome | blastn | 14003 | 326 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus sp. IMCC34717 | |
| 19453130 | 19453130 | PRJNA1200128_S_NODE_26636_length_186_cov_1.160839_g26527_i0 | PRJNA1200128 | 26636 | 186 | 1.160839 | 2.15916054 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 193 | 8.98e-45 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g26527 | i0 | 85.561 | 363.60752688172 | 187 | 24 | 100 | 2 | 1 | 186 | 2749580 | 2749764 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 67631 | 193 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 27388830 | 27388830 | PRJNA1200128_S_NODE_33103_length_173_cov_1.084615_g32994_i0 | PRJNA1200128 | 33103 | 173 | 1.084615 | 1.87638395 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 40.8 | 0.0432 | NR | PYL54605.1 | 2026799 | g32994 | i0 | 44.4 | 0.780346820809249 | 45 | 24 | 76.3 | 1 | 1 | 132 | 26 | 70 | PYL54605.1 MAG: hypothetical protein DMF29_06015 [Verrucomicrobiota bacterium] | diamond | 135 | 40.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27514948 | 27514948 | PRJNA1200128_S_NODE_28963_length_181_cov_1.021739_g28854_i0 | PRJNA1200128 | 28963 | 181 | 1.021739 | 1.84934759 | Pelagicoccus sp. SDUM812 | 2921790 | Bacteria | Bacteria | 42.7 | 0.0161 | NR | WP_309019849.1 | 3041267 | g28854 | i0 | 39.2 | 0.845303867403315 | 51 | 31 | 84.5 | 0 | 6 | 158 | 34 | 84 | WP_309019849.1 CehA/McbA family metallohydrolase [Pelagicoccus sp. SDUM812003] | diamond | 153 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Pelagicoccaceae | Pelagicoccus | Pelagicoccus sp. SDUM812003 | |
| 29914802 | 29914802 | PRJNA1200128_S_NODE_8671_length_264_cov_7.723982_g8562_i0 | PRJNA1200128 | 8671 | 264 | 7.723982 | 20.39131248 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 43.9 | 0.0189 | NR | MBI5425267.1 | 2026771 | g8562 | i0 | 39.7 | 1.97727272727273 | 58 | 29 | 62.5 | 2 | 203 | 39 | 299 | 353 | MBI5425267.1 glycoside hydrolase family 2 [Opitutia bacterium] | diamond | 522 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 31558159 | 31558159 | PRJNA1200128_S_NODE_14656_length_224_cov_1.165746_g14547_i0 | PRJNA1200128 | 14656 | 224 | 1.165746 | 2.61127104 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42.4 | 0.0394 | NR | MDX1951866.1 | 2026799 | g14547 | i0 | 34.8 | 0.616071428571429 | 46 | 30 | 61.6 | 0 | 148 | 11 | 226 | 271 | MDX1951866.1 POTRA domain-containing protein [Verrucomicrobiota bacterium] | diamond | 138 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32570609 | 32570609 | PRJNA1200128_S_NODE_8079_length_270_cov_3.070485_g7970_i0 | PRJNA1200128 | 8079 | 270 | 3.070485 | 8.2903095 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 46.2 | 0.0031 | NR | WP_395745445.1 | 1965333 | g7970 | i0 | 39.7 | 0.7 | 63 | 30 | 61.1 | 2 | 3 | 167 | 163 | 225 | WP_395745445.1 O-antigen ligase family protein [Prosthecobacter sp.] | diamond | 189 | 46.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;