RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1200128", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 7 ✖

tax_phylum 1

  • Kitrinoviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1200128 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2877863 2877863 PRJNA1200128_S_NODE_10563_length_248_cov_2.175610_g10454_i0 PRJNA1200128 10563 248 2.17561 5.3955128 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.006   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g10454 i0 96.97 0.245967741935484 33 0 13 1 217 248 38 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 61 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
5430205 5430205 PRJNA1200128_S_NODE_24665_length_191_cov_0.952703_g24556_i0 PRJNA1200128 24665 191 0.952703 1.81966273 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g24556 i0 100 0.738219895287958 29 0 15 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
6704828 6704828 PRJNA1200128_S_NODE_25126_length_189_cov_6.102740_g25017_i0 PRJNA1200128 25126 189 6.10274 11.5341786 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g25017 i0 100 0.301587301587302 29 0 15 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
10530988 10530988 PRJNA1200128_S_NODE_6209_length_293_cov_3.296000_g6100_i0 PRJNA1200128 6209 293 3.296 9.65728 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.002   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g6100 i0 100 0.197952218430034 30 0 10 0 1 30 6 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
13080744 13080744 PRJNA1200128_S_NODE_5491_length_306_cov_2.250951_g5382_i0 PRJNA1200128 5491 306 2.250951 6.88791006 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.008   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g5382 i0 100 0.186274509803922 29 0 9 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
15629875 15629875 PRJNA1200128_S_NODE_21353_length_200_cov_0.847134_g21244_i0 PRJNA1200128 21353 200 0.847134 1.694268 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g21244 i0 100 0.285 29 0 15 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
15630009 15630009 PRJNA1200128_S_NODE_7933_length_272_cov_1.615721_g7824_i0 PRJNA1200128 7933 272 1.615721 4.39476112 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.002   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g7824 i0 96.97 0.224264705882353 33 1 12 0 1 33 6 38 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 61 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;